PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA03g27130
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 246aa    MW: 27986.6 Da    PI: 4.9356
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA03g27130genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.2e-1861274127
         NAM   4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100
                  ++FhP + el+ + Lk+ ++g++l++   ik v+iy    Pw++     +e+k+ yf ++ +k++++++++ r+  +g+W+ + +  +++++ +g++v
  CA03g27130   6 SIQFHPVEAELI-NLLKRFLKGEHLRC--PIKFVEIYGDqTPWQFY---GSEDKSGYFITPLKKRKKSDQKHARTCGNGTWRGQTSAVPIKNRkGGSVV 98 
                 579*********.99*********998..79****997548****5...5678899**********************************99867888* PP

         NAM 101 glkktLvfy.kgrapkge.ktdWvmheyr 127
                 g ++  ++  kg++ +g+  t+W+m ey 
  CA03g27130  99 GYRRNYIYTsKGNKTSGSaTTNWLMREYF 127
                 ********9666666665389*******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.9633151IPR003441NAC domain
SuperFamilySSF1019412.35E-206150IPR003441NAC domain
PfamPF023651.4E-106126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MSSAVSIQFH PVEAELINLL KRFLKGEHLR CPIKFVEIYG DQTPWQFYGS EDKSGYFITP  60
LKKRKKSDQK HARTCGNGTW RGQTSAVPIK NRKGGSVVGY RRNYIYTSKG NKTSGSATTN  120
WLMREYFVGD DFFKVNNIPK QDYALCRIKK HVRVKMDDDD DAVNMEEQDA LETIRGMLLQ  180
PDSTCCTTQE VTEETDQWES IINEVCDEKI DGVENAVMNW ADDLFIDITD LGDIICCPSE  240
SILEI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16165KKRKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016563505.10.0PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A2G2Y6R40.0A0A2G2Y6R4_CAPAN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.13e-14NAC domain containing protein 2