|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
CA03g13530 |
Common Name | LOC107851226 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
Family |
ERF |
Protein Properties |
Length: 273aa MW: 30591.5 Da PI: 7.9386 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CA03g13530 | genome | PEP | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.7 | 7.9e-20 | 123 | 173 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp + k +r++lg+f+ta +Aaka+++a+ kl+g
CA03g13530 123 HYRGVRQRP-WGKFAAEIRDP---NrKGTRVWLGTFDTAVDAAKAYDRAAFKLRG 173
8********.**********9...6566*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MGSPQENCSF DMIRQHLDDI SLMEYYCPEN TLYSQSCESL DQTSVSFETS SNLDDISSFF 60 SSSKTDFGCF EFETKPITSA ATSISSNSPK KRSFNERKPS LNIAVPVKPV VVQKVEVVRE 120 KKHYRGVRQR PWGKFAAEIR DPNRKGTRVW LGTFDTAVDA AKAYDRAAFK LRGSKAILNF 180 PLEVANFKQQ NSTVEVPQQV NSSGSKRARE KEELAINKEM KIEEEERVAQ TAPLTPSNWS 240 TIWDSGNGKG IFEVPPLSPL SPHMSYSQLV MI*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase/phosphatase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Strongly induced by ethephon (ethylene-releasing compound) in buds and in leaves. Also strongly induced by cycloheximide, mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by a protein kinase cascade, and to be negatively regulated by protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AY789638 | 0.0 | AY789638.1 Capsicum annuum ethylene responsive element binding protein C4 mRNA, complete cds. |