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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CA02g25090 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family |
GRAS |
Protein Properties |
Length: 452aa MW: 50981.3 Da PI: 5.7711 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CA02g25090 | genome | PEP | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 307.2 | 3.8e-94 | 59 | 448 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn.sseelaalklfsevsPilkfshltaN 99
++lL++cA+a++s+d +laq++L+ l+++a pdgd++qRl+ f++AL r a+ +++k l+++ +++++ ++ ++ l f++++P+++f++ +aN
CA02g25090 59 EQLLVHCANAIESNDSTLAQQILWVLNNIAPPDGDSNQRLTCGFLRALIVRAAK--IGTCKLLTANLNHSMEtHKFSIIELASFVDLTPWHRFGFTAAN 155
79****************************************************..666766666655544436666666677**************** PP
GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl.......vakrled 188
aIleaveg + +Hi+Df++++++Q p+L++a++sR egpp +++T+ g+ e ++ee+g +L +fA++ +v +ef+v+ ++
CA02g25090 156 GAILEAVEGYSIIHIVDFSLTHCMQIPTLIDAISSRLEGPPLVKLTVAGATEDLppmLDLSYEELGAKLVNFARSRNVMMEFRVIpssssdgF----SN 250
**************************************************776698888999**********************977633333....33 PP
GRAS 189 leleeLrvkp......gEalaVnlvlqlhrll..........desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+ +e+Lrv++ gEal++n++++lh+++ ++ +++s r+ +Lk++++l P++vv+v+++ad +s++++ r+ +a++y + +d++
CA02g25090 251 V-IEQLRVQNlirpenGEALVINCHMMLHYIPeettllsnrfTSECTTNSFRTMFLKAIRNLDPTIVVLVDEDADFTSNNLVCRLRSAFNYLWIPYDTV 348
3.66666666666678****************88888888877777778899*********************************************** PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
++ lpr s++r+++E+ + ++i+nv+a+eg +r er e +++W +r+++a +++ +se+a++++k +l +++ g+ ++ e++ lvl+Wk++++v++
CA02g25090 349 DTFLPRGSKQRQWYEAD-ICWKIENVIANEGVQRLERLEPKSQWVQRMRNANLRSSGFSEEAVMEVKNMLDEHA-AGWGLKREEEDLVLTWKGHNVVFA 445
*****************.********************************************************.8999******************** PP
GRAS 371 SaW 373
+aW
CA02g25090 446 TAW 448
*** PP
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Sequence ? help Back to Top |
Protein Sequence Length: 452 aa
Download sequence Send
to blast |
MMQFTESLPP SLHQQVSPFS NLMMNKNSST NNQIQRARPW PGFHTPKNLG NIGDTNCMEQ 60 LLVHCANAIE SNDSTLAQQI LWVLNNIAPP DGDSNQRLTC GFLRALIVRA AKIGTCKLLT 120 ANLNHSMETH KFSIIELASF VDLTPWHRFG FTAANGAILE AVEGYSIIHI VDFSLTHCMQ 180 IPTLIDAISS RLEGPPLVKL TVAGATEDLP PMLDLSYEEL GAKLVNFARS RNVMMEFRVI 240 PSSSSDGFSN VIEQLRVQNL IRPENGEALV INCHMMLHYI PEETTLLSNR FTSECTTNSF 300 RTMFLKAIRN LDPTIVVLVD EDADFTSNNL VCRLRSAFNY LWIPYDTVDT FLPRGSKQRQ 360 WYEADICWKI ENVIANEGVQ RLERLEPKSQ WVQRMRNANL RSSGFSEEAV MEVKNMLDEH 420 AAGWGLKREE EDLVLTWKGH NVVFATAWVP L*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975514 | 0.0 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |