PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA02g22730 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 219aa MW: 25562 Da PI: 6.6172 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 51.7 | 3e-16 | 7 | 138 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkdkevls 94 G+rFhPtd+e + +L + v++++++ + + +++d+y k ePw++ + +++ +++++ yf +k+++++ +g+ n g Wk++ k ++++ CA02g22730 7 GYRFHPTDSEGL-TFLLRFVAKQEMHDSGFiTTNIDVYgKQEPWEIYsHgvpCAD-DDDSCyrYFITKKSNTTYHGEVGNT---LGSWKQQDKGQPIHY 100 9*********99.7888888888877777735566*99456*****733554333.4445523566666555555555444...499***********9 PP NAM 95 kkgel......vglkktLvfykgrapkgektdWvmheyrl 128 +kg+ +g+k+ + + +++++ W+m+e++l CA02g22730 101 NKGNSssstpvIGCKRRMRYMIKDHKD--DGLWLMKEFEL 138 84444566777*********9554444..89*******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 18.03 | 4 | 161 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 3.79E-17 | 5 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-11 | 7 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence Send to blast |
MEKKGLGYRF HPTDSEGLTF LLRFVAKQEM HDSGFITTNI DVYGKQEPWE IYSHGVPCAD 60 DDDSCYRYFI TKKSNTTYHG EVGNTLGSWK QQDKGQPIHY NKGNSSSSTP VIGCKRRMRY 120 MIKDHKDDGL WLMKEFELSN VILKRFDEDR RDYVLCAIKK KPIDTCPFEM NYDSDETDEV 180 TCSNDNDNTM YRNLLMMFLF WKISRVLLSC AFLLYSLH* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016560607.1 | 1e-134 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A2G3AAG1 | 1e-164 | A0A2G3AAG1_CAPAN; Uncharacterized protein | ||||
STRING | XP_009774958.1 | 4e-67 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 7e-08 | NAC 014 |