 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
CA02g21840 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
| Family |
GATA |
| Protein Properties |
Length: 312aa MW: 33661.4 Da PI: 4.9315 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CA02g21840 | genome | PEP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 26.5 | 8.8e-09 | 241 | 266 | 10 | 35 |
GATA 10 plWRrgpdgnktLCnaCGlyyrkkgl 35
p + gp g ktLCnaCG+++++ +l
CA02g21840 241 PAVHAGPMGAKTLCNACGVRFKSGRL 266
56789*****************9986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MDYVLGALKS SFMPETQLKM TQNMGYGDEF SAAGAGQNGV SGDDFFVDGL LDLSNGFAEG 60
EGEEEEEEEE KQQGGEDNSV HKLCPVSPQK KPEAVDTISV PVKEDFASLP VSEISVPEDD 120
LDSLEWLSHF VEDSFSGYSN AYPAGKLPVE KQSGVGENPV QEKCFETPVQ TKARTKRGRT 180
SVRVWPSGSG SLTESSSSST SSSSTTTMSS SPTAAWVLYP TPVYSAESPG KRLTKKLKKK 240
PAVHAGPMGA KTLCNACGVR FKSGRLLPEY RPACSPTFSS ELHSNNHRKV LEMRRKKESE 300
ESGLAQPVQI F*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 230 | 239 | KRLTKKLKKK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}. |
