PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA02g18430 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | G2-like | ||||||||
Protein Properties | Length: 114aa MW: 12703.5 Da PI: 6.0941 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 30.6 | 7.2e-10 | 43 | 67 | 2 | 26 |
G2-like 2 prlrWtpeLHerFveaveqLGGsek 26 p+lrWt+ LH+rFv+ave GG+++ CA02g18430 43 PKLRWTTGLHRRFVNAVELAGGEDR 67 89********************997 PP | |||||||
2 | G2-like | 35 | 3.1e-11 | 85 | 110 | 26 | 51 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQ 51 AtPk +lelm+vkgL +++vkSHLQ CA02g18430 85 GATPKMVLELMDVKGLNVNQVKSHLQ 110 59************************ PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.5E-21 | 39 | 110 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.16E-9 | 42 | 111 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.7E-8 | 85 | 111 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence Send to blast |
MSGSSLEDPS CDLTLSLGPV EDPNVLESSN ESEVRSYARS RMPKLRWTTG LHRRFVNAVE 60 LAGGEDRKPT SLFFFLHEEF YIHTGATPKM VLELMDVKGL NVNQVKSHLQ VII* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016560137.1 | 1e-55 | PREDICTED: uncharacterized protein LOC107859599 | ||||
TrEMBL | A0A2G3D773 | 4e-74 | A0A2G3D773_CAPCH; Putative transcription factor KAN2 | ||||
STRING | Solyc02g080860.1.1 | 3e-20 | (Solanum lycopersicum) | ||||
STRING | XP_009782820.1 | 3e-20 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7450 | 20 | 29 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02060.1 | 3e-19 | G2-like family protein |