PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | CA02g17910 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 247aa MW: 28720.4 Da PI: 8.559 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.2 | 1.4e-18 | 8 | 135 | 11 | 128 |
NAM 11 deelvveyLkkkvegkkleleevikevdiykv..ePwdLpk.....kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelv 100 + +l+ yL+k v g ++e+ + i+++d+y + Pw+L k + k++++++ yfF++ +kk+ +g++ nr ++ g Wk +ke+++k+g+++ CA02g17910 8 ERDLL-SYLQKFVCGMPIEC-HDIRHIDLYGIkkPPWELFKgllrsEGKTGTDQLnYFFTPLKKKSVKGRNFNRtIAGVGQWKGRDISKEIYDKEGSVI 104 45566.9*************.56*****9976447****74456553233333446******************66779******************** PP NAM 101 glkktLvfykg...rapkgektdWvmheyrl 128 g k+t+ f ++ ++++ W+m+ey+l CA02g17910 105 GSKRTFRFDEEssrSDNNQLTVYWIMKEYSL 135 ********954221334444678******98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.936 | 1 | 162 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.9E-8 | 8 | 135 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.88E-19 | 12 | 162 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence Send to blast |
MKFQQYNERD LLSYLQKFVC GMPIECHDIR HIDLYGIKKP PWELFKGLLR SEGKTGTDQL 60 NYFFTPLKKK SVKGRNFNRT IAGVGQWKGR DISKEIYDKE GSVIGSKRTF RFDEESSRSD 120 NNQLTVYWIM KEYSLDETIV DKLRQRDEIQ KEDYVVCSIM RKVSSRKSSQ DVPSKAENEV 180 FNHHHRDNVP SSSAETCRPW PYHDAAEIRS LPPLDGPFRS LNEEDLALFE KPDPGYPQAY 240 QNKKLG* |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016558405.1 | 0.0 | PREDICTED: NAC domain-containing protein 66-like | ||||
TrEMBL | A0A1U8FI57 | 0.0 | A0A1U8FI57_CAPAN; NAC domain-containing protein 66-like | ||||
STRING | XP_009607153.1 | 7e-82 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3381 | 10 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G79580.3 | 1e-13 | NAC family protein |