PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g15290
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 340aa    MW: 37757.6 Da    PI: 10.3599
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g15290genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.63.1e-0855106254
         AP2   2 gykGVrwdkkrgr..WvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 
                 +y+GVr +++ +   + AeI  p   g++++++lg+++t+++Aa+ ++ a++ l+
  CA02g15290  55 RYQGVRKRRRVNGikYGAEIIKP---GQKRSIWLGTYDTEKKAAQVYDTAARWLK 106
                 699**8888766688****9998...557**********99*********98665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.01E-1855117No hitNo description
Gene3DG3DSA:3.30.730.104.2E-1955116IPR001471AP2/ERF domain
PROSITE profilePS5103216.84555115IPR001471AP2/ERF domain
SMARTSM003802.1E-1955121IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-1356116IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MTKQIPPLYK STVPLHFSSL ILRYIKNFFS LFFIFEMAEI ENDNAAVAVP PNTVRYQGVR  60
KRRRVNGIKY GAEIIKPGQK RSIWLGTYDT EKKAAQVYDT AARWLKGPGA KLNFPHDDIT  120
EKAKDASNEL NPRNDVSNEG DKNNSDDVIP DESSGTASSS KAGDITSTTK ASRSALRVRE  180
PIKNPHAPRS KAGGGALKIR EPMNQNPQAK AHSGALRIQE KNQNPQAPHF SVDIVSSSNA  240
GVDVLRTREP NQNPQVPRFL VVNGGDAPFQ PTYLDKFYME ILTRARILFP SRANFRKVTV  300
DYLSDFHNHV GSTERVVQNQ PPFTTAVYTE LRLAPLGSK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15963RKRRR
26064KRRRV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016558359.10.0PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLA0A1U8FRI80.0A0A1U8FRI8_CAPAN; Ethylene-responsive transcription factor 9
TrEMBLA0A2G3A8930.0A0A2G3A893_CAPAN; ethylene-responsive transcription factor 1-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.16e-15ethylene responsive element binding factor 4