PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA02g15180

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 281aa MW: 30455.3 Da PI: 10.1163

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA02g15180	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.9	4.7e-38	34	90	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +kcprCds+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rk k++ CA02g15180 34 PQKCPRCDSNNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGTLRNVPVGGGCRKGKRT 90 689**************************************************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	28.863	35	89	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.3E-32	35	89	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	8.0E-25	36	89	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	37	73	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence Send to blast
MEQGGRSSGE SDRNQQQRRM KMPENNSSQP QPPPQKCPRC DSNNTKFCYY NNYSLTQPRY 60 FCKTCRRYWT QGGTLRNVPV GGGCRKGKRT MKGGSVGVSC GSSSSASESS SRSYQQQSQQ 120 IPNLSAAAAA VFFSGNNNSR SQPPPLPSLS SLYTGGVGGG GGFLSTLASM QSMTQLSQGV 180 NNDHSQLGVI SASNSSQFGN FNIPSSIPPK VQINQQMESG IYQMVVNREK PMESSFYPSD 240 QISQFQPTRP LGSWTQRFIN NNNNNNIWPN ASASSSSSXQ *

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016559835.1	0.0	PREDICTED: dof zinc finger protein DOF1.1-like
TrEMBL	A0A2G3A8C7	0.0	A0A2G3A8C7_CAPAN; Dof zinc finger protein PBF
STRING	Solyc02g077960.1.1	1e-104	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA88	24	419

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-33	TARGET OF MONOPTEROS 6