PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA02g14180 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Dof | ||||||||
Protein Properties | Length: 172aa MW: 19774.7 Da PI: 7.8281 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 77.8 | 1.3e-24 | 53 | 92 | 2 | 41 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWt 41 ++k+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryW CA02g14180 53 PDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWX 92 68999**********************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 3.0E-19 | 52 | 91 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 2.2E-19 | 55 | 92 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 19.806 | 57 | 111 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence Send to blast |
MAEVQESRIS QGIKLFGATI QVQEIKQAKV HQPTNKVDQD HDNNNNNDQE KRPDKIIPCP 60 RCKSMETKFC YFNNYNVNQP RHFCKGCQRY WXXXXXXXXX XXXXAKPPCG PGPHGDMNGL 120 SDGYFFDVTN HHGNNNNIHQ LEFDGVVAEE DQWHLFQAAK RRRSTSHTQS C* |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC215388 | 6e-80 | AC215388.2 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0122E16, complete sequence. | |||
GenBank | HG975514 | 6e-80 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016562030.1 | 9e-91 | PREDICTED: dof zinc finger protein DOF1.5-like | ||||
TrEMBL | A0A2G3A880 | 1e-114 | A0A2G3A880_CAPAN; Uncharacterized protein | ||||
STRING | XP_009794806.1 | 8e-75 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7240 | 22 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29160.1 | 3e-34 | Dof family protein |