PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA02g13270

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

BES1

Protein Properties

Length: 292aa MW: 31021.4 Da PI: 5.5821

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA02g13270	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	124.5	1.3e-38	2	109	36	147
DUF822 36 qGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa. 133 +Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++ +g s s+sp+ss+q sp sy++sp+sss+psp+s+ + + ++ CA02g13270 2 YGNYKLPKHCDNNEVLKALCKEAGWMVEEDGTTYRKGCKPVERMDNIGGSVSVSPCSSYQ--------LSPGVSYNPSPASSSIPSPVSSHYVANVQNn 92 8*********************************************************........6777777777777777777776655443334 PP DUF822 134 ...asllpvlsvlslvs 147 +sl+p+l++ls+ s CA02g13270 93 sdpNSLIPWLKNLSSGS 109 55699*****98754 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.6E-42	1	106	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence Send to blast
MYGNYKLPKH CDNNEVLKAL CKEAGWMVEE DGTTYRKGCK PVERMDNIGG SVSVSPCSSY 60 QLSPGVSYNP SPASSSIPSP VSSHYVANVQ NNSDPNSLIP WLKNLSSGSS PSLSNFPHNL 120 CVPGGSISAP VTPPSSSPTA RTPRMNDHWD NPKANSSWIQ QHYPFLPSST PPSPGRQTPP 180 DSGWLSGVQT PQDGPSSPTF SLVSSNPFGF KEPLSNGGSR MWTPGQSGTC SPAVGACMDQ 240 TADVPMSDVI SAEFAFGSNM KGVVKPWEGE RIHEECISDD LELTLGNSST R*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-17	3	42	404	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-17	3	42	404	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-17	3	42	404	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-17	3	42	404	443	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975441	0.0	HG975441.1 Solanum pennellii chromosome ch02, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016559615.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4 isoform X1
Refseq	XP_016559616.1	0.0	PREDICTED: BES1/BZR1 homolog protein 4 isoform X2
Swissprot	Q9ZV88	1e-117	BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBL	A0A2G3A7T6	0.0	A0A2G3A7T6_CAPAN; Protein BZR1-like protein 3
STRING	PGSC0003DMT400073250	0.0	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1984	24	64

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	8e-94	BES1/BZR1 homolog 4