PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g06780
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 203aa    MW: 22829.5 Da    PI: 10.5294
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g06780genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573446e-142093283
      DUF573  2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83
                 fqr+w+++De +lL ++ +++a +gk+p+   +++++++k++isf+ +  q+ +Kir+LK+  +k +++      ++ +++
  CA02g06780 20 PFQRVWTDKDEKILLEAIGSYRAIHGKEPT--SNNLFNIIKGKISFEPTLVQVGNKIRSLKRIKRKTRQR------IVEDTP 93
                69************************9876..589**************************976666666......333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.4E-1121103IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
SKAITHVKDD NALVKTQSKP FQRVWTDKDE KILLEAIGSY RAIHGKEPTS NNLFNIIKGK  60
ISFEPTLVQV GNKIRSLKRI KRKTRQRIVE DTPAEKSLFC SSQKVLGVNK MCSTTAQSSK  120
GKKVLNDAEI ARIVMTLFQG YEGDEVMQIE TSTRKVSQLI ASGLSTKWKD LIKAQANQYL  180
IGLNNRKSKV ELFLEMMEVE AR*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016561821.11e-146PREDICTED: uncharacterized protein LOC107860858 isoform X1
TrEMBLA0A1U8FRK21e-145A0A1U8FRK2_CAPAN; uncharacterized protein LOC107860858 isoform X1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-09DNA-binding storekeeper protein-related transcriptional regulator