PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA02g05650 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bZIP | ||||||||
Protein Properties | Length: 244aa MW: 26616.1 Da PI: 10.115 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.7 | 6.7e-10 | 183 | 210 | 4 | 31 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeL 31 +++ +r++kNRe+A rsR+RK+++ + L CA02g05650 183 DQKNKRMIKNRESAARSRARKQESFASL 210 6899*******************98766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 2.2E-7 | 184 | 210 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 7.8E-6 | 185 | 210 | No hit | No description |
SuperFamily | SSF57959 | 1.24E-5 | 185 | 211 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 187 | 202 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MRSSSSEEHQ QLKGLDKNLA TYSSKSSSPS SSTSSSNNYP INPVLINSKT MEEVWKDINL 60 SSLNDHTCSR AHMDPQSTTA STINFGGMIL QDLLARPLAS DPPTATTAYG SPVPPPPPVT 120 MLTLNSGPEL HFFSSLNPLR KTSICLPKNI SNSSTFEALA SPAAGRNANG KKRHPESDNH 180 SGDQKNKRMI KNRESAARSR ARKQESFASL CMPFKIECVM FLRCYRLRAA PPKCVSYRPS 240 TLN* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016561863.1 | 1e-125 | PREDICTED: bZIP transcription factor 27-like | ||||
TrEMBL | A0A2G3A4D6 | 1e-161 | A0A2G3A4D6_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400061403 | 1e-63 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3572 | 22 | 39 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.1 | 2e-20 | basic region/leucine zipper motif 27 |