PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g04370
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 250aa    MW: 28757.2 Da    PI: 4.8139
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g04370genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-19101151255
         AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  CA02g04370 101 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFSTAEEAAMAYDKAALRIRG 151
                 7********.**********3...2234*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.7E-32100160IPR001471AP2/ERF domain
PfamPF008473.5E-14101151IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-23101161IPR016177DNA-binding domain
SMARTSM003803.0E-38101165IPR001471AP2/ERF domain
PROSITE profilePS5103223.841101159IPR001471AP2/ERF domain
CDDcd000181.83E-31101159No hitNo description
PRINTSPR003674.3E-11102113IPR001471AP2/ERF domain
PRINTSPR003674.3E-11125141IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    Send to blast
MTHIVEKVVA CEEILENVWA NFISKNDQNS QSVTNDQCYE KYWEQFPVLE RLPSLGADTW  60
EDILDGIMAP RDDKKNSTGE STSKNEDVEK KKKMVNNNTR HYRGVRRRPW GKYAAEIRDS  120
SRKGARVWLG TFSTAEEAAM AYDKAALRIR GPKANLNFPL ETVAQAIVTS NNCLHEKELN  180
FSLSSGDQYN SRKRVSRDWN MYENLEEINL LPVEKRIMRS MEEDLFNDLD ILEFEDLGSD  240
YLDSLLSSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-28100160161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00441DAPTransfer from AT4G18450Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754411e-159HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016562046.10.0PREDICTED: ethylene-responsive transcription factor ERF091-like
TrEMBLA0A1U8FS970.0A0A1U8FS97_CAPAN; Ethylene-responsive transcription factor 2
TrEMBLA0A2G3A6U40.0A0A2G3A6U4_CAPAN; ethylene-responsive transcription factor ERF091-like
STRINGPGSC0003DMT4000278391e-132(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112371823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.15e-31ERF family protein