PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g33510
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 178aa    MW: 19671 Da    PI: 4.4804
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g33510genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.68.2e-151866255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+G+r ++ +g+Wv+eIr p   gk++r++lg++ t+++Aa+a++ a ++l+g
  CA01g33510 18 IYRGIR-CR-SGKWVSEIRQP---GKTTRIWLGTYPTPQMAAAAYDVAVLALKG 66
                69***9.55.6*********8...557**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-81766IPR001471AP2/ERF domain
CDDcd000182.90E-241777No hitNo description
PROSITE profilePS5103218.361875IPR001471AP2/ERF domain
SMARTSM003801.2E-231881IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-151876IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-231876IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MSDLSPTPKS RTNTKHPIYR GIRCRSGKWV SEIRQPGKTT RIWLGTYPTP QMAAAAYDVA  60
VLALKGCQNV VLNFPNHAMA YRGDDDRLLV SSSGGTTCNE GGSVEFPSSS ENYAMQMGNT  120
QMVRDEEEYV DEEALFDFPS LIVNMAEAMM LSPPRINTFP SEDYSSGEFD GESLWSY*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754471e-56HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016552063.11e-122PREDICTED: ethylene-responsive transcription factor ERF027-like
SwissprotQ9CAN96e-35ERF26_ARATH; Ethylene-responsive transcription factor ERF026
TrEMBLA0A1U8EXZ11e-121A0A1U8EXZ1_CAPAN; ethylene-responsive transcription factor ERF027-like
STRINGPGSC0003DMT4000326241e-78(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-34ERF family protein