PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g33500
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 223aa    MW: 24516.3 Da    PI: 4.9582
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g33500genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.32.6e-153381255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 y+G+r ++ +g+Wv+eIr+p   gk++r++lg++ t+++Aa+a++ a ++l+g
  CA01g33500 33 IYRGIR-CR-SGKWVCEIREP---GKTTRIWLGTYPTPQMAAAAYDVAVLALKG 81
                69***9.55.6*********8...557**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.47E-233292No hitNo description
PfamPF008473.7E-93281IPR001471AP2/ERF domain
SMARTSM003806.2E-233396IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-233391IPR001471AP2/ERF domain
SuperFamilySSF541712.16E-153391IPR016177DNA-binding domain
PROSITE profilePS5103218.43390IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MDDPSHTTSG QLVLPNIIVD NKKCVRTITK HPIYRGIRCR SGKWVCEIRE PGKTTRIWLG  60
TYPTPQMAAA AYDVAVLALK GCQNVVLNFP NHVDSYPKLP PSPSREDIRR AXATAAAMMG  120
QKGDEDDDRS SGSKGGEDTG NEGGGLIESS SSENYAVDIG KHINICLPRN KQEYVDEEEL  180
FDFPSLLVNM AEAMMLSPPR INSTSMEDYS PKDSNVDSLW NY*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754472e-74HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016552063.11e-89PREDICTED: ethylene-responsive transcription factor ERF027-like
TrEMBLA0A2G3APK12e-93A0A2G3APK1_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000325323e-82(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55322110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.12e-31ERF family protein