PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g19290
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 306aa    MW: 33783.8 Da    PI: 8.6587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g19290genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.1e-204292256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                ++ GVr+++ +grWvAeI+d s   +r r +lg+++t+eeAa+a+++a+++l+ge
  CA01g19290 42 KFVGVRQRP-SGRWVAEIKDSS---QRVRLWLGTYDTPEEAARAYDEAARALRGE 92
                799******.7*********43...36**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.2E-284299IPR001471AP2/ERF domain
PROSITE profilePS5103220.5084299IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-2042100IPR016177DNA-binding domain
CDDcd000183.17E-3242101No hitNo description
SMARTSM003802.2E-3742105IPR001471AP2/ERF domain
PfamPF008472.6E-154292IPR001471AP2/ERF domain
PRINTSPR003673.1E-74354IPR001471AP2/ERF domain
PRINTSPR003673.1E-76581IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MAPGSETTTT TSTTTTTNTN TNTSTTKSSS SSTQISKSIT RKFVGVRQRP SGRWVAEIKD  60
SSQRVRLWLG TYDTPEEAAR AYDEAARALR GENARTNFAP SAPNNPNTND QSNVLQCYHD  120
TKHGLSFSSI KAKLSKNLQS IMARNSENKS SSKSRVSDHF TFARIFHSKN SYDHQYQNHH  180
HVDMKKIEKV VQPSIRVLPH HVTDNDNNNI NDSYTSWENS SVSDCSSEWT AFRQLGLESD  240
NGSDGSEFFL GSDPMAGWIS SPDIMSSSST TEGSRSKRFK VSSSVMVPPT FSESPLHGDN  300
YVGFN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1442981471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016582413.10.0PREDICTED: ethylene-responsive transcription factor RAP2-12-like
TrEMBLA0A2G3AGW60.0A0A2G3AGW6_CAPAN; Ethylene-responsive transcription factor LEP
STRINGXP_009762762.11e-134(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA125641721
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-18related to AP2 11