PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA01g12890 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 106aa MW: 12012.8 Da PI: 10.101 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.2 | 7.4e-12 | 21 | 70 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr++k g WvAe+r+ + +++g+f tae A +++ +++g CA01g12890 21 RYKGVRQRK-PGNWVAEVRVsG----TKDPIWIGTFNTAEVATFPYDESLIEMKG 70 8*******9.9*********33....35************998888888877776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.11E-18 | 20 | 76 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 5.5E-19 | 21 | 77 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.81E-13 | 21 | 77 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 5.5E-13 | 21 | 84 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 14.961 | 21 | 81 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 8.8E-7 | 21 | 57 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence Send to blast |
MISIENYLER DLKLPQEKGK RYKGVRQRKP GNWVAEVRVS GTKDPIWIGT FNTAEVATFP 60 YDESLIEMKG ANVVTNILKT PPRYTSHMKI NYMNPPSSSI DNARI* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016550036.1 | 2e-39 | PREDICTED: ethylene-responsive transcription factor CRF5-like | ||||
TrEMBL | A0A2G3AHX7 | 3e-72 | A0A2G3AHX7_CAPAN; Uncharacterized protein | ||||
STRING | XP_009783397.1 | 9e-26 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 3e-15 | ERF family protein |