PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA01g12400 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 167aa MW: 19024 Da PI: 10.2241 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 39.5 | 1.4e-12 | 81 | 131 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++y GVr++k +g+Wv +r+ + r+++g+f t eeA a+++ ++++g CA01g12400 81 KKYEGVRQRK-QGKWVPDVRVlG-----TkDRIWIGTFSTVEEATLAYDKTINEMKG 131 59*******9.9****6666644.....34************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 8.02E-20 | 81 | 137 | No hit | No description |
SuperFamily | SSF54171 | 5.95E-14 | 82 | 138 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 1.4E-19 | 82 | 137 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 15.053 | 82 | 139 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.7E-16 | 82 | 147 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.0E-8 | 82 | 131 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.7E-7 | 83 | 94 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.7E-7 | 105 | 121 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MAFNEEHGEK EVFRNRSEVI AMEKLTDQIG GSSSILPRPG VVHFSDCDTM KLTTDEEGKA 60 KPPKKKSHRY MKRHLPQKKV KKYEGVRQRK QGKWVPDVRV LGTKDRIWIG TFSTVEEATL 120 AYDKTINEMK GAYAVTNILK PPPRYPSPME IIYMNPPSSS IYNARI* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 63 | 67 | KKKSH |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016550036.1 | 1e-106 | PREDICTED: ethylene-responsive transcription factor CRF5-like | ||||
TrEMBL | A0A2G3AI22 | 1e-120 | A0A2G3AI22_CAPAN; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61630.1 | 6e-17 | cytokinin response factor 6 |