PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g11960
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 277aa    MW: 31709.6 Da    PI: 5.362
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g11960genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.13.7e-15611711128
         NAM  11 deelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgelvglkktL 106
                 d+el++ yL k v g ++++ + i+ vd+y   +P++L ++  + ++  y F+k +kk+++gk  nr  +  +g Wk   ++k+v++++++++g +kt+
  CA01g11960   6 DDELLMAYLLKFVCGMPIQC-QQIQIVDLYGNnKPSQLFNT--TITSVNYVFTKLKKKTRNGKTINRgiVGGDGSWKGINNSKPVYNREKSVIGFQKTF 101
                 89******************.77******97648****632..224567******************7445599************************* PP

         NAM 107 vfykgrapkgektdWvmheyrl 128
                  f +g         W m+eyrl
  CA01g11960 102 RFDEG------IHVWNMKEYRL 117
                 **843......457******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.2661144IPR003441NAC domain
PfamPF023657.7E-76117IPR003441NAC domain
SuperFamilySSF1019412.48E-186143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MGNNFDDELL MAYLLKFVCG MPIQCQQIQI VDLYGNNKPS QLFNTTITSV NYVFTKLKKK  60
TRNGKTINRG IVGGDGSWKG INNSKPVYNR EKSVIGFQKT FRFDEGIHVW NMKEYRLTDE  120
TIAVLRKRCQ ILHEDFVVCR ITYHVPKPKQ LTAKSSAQYQ FQENQELGGS NAATVVPYDQ  180
FSSIWNGNEY SITQETPYVS PNDDIARYHR ELDAYAASIL ESVSPIDHIA HRELDAYAAT  240
TLEFDMNSLD PYVPQDEDYC SLFCEDFYIG HTDLWS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016541188.10.0PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A1U8E1N40.0A0A1U8E1N4_CAPAN; Uncharacterized protein
TrEMBLA0A2G3AHR70.0A0A2G3AHR7_CAPAN; NAC domain-containing protein 101-like
STRINGPGSC0003DMT4000613906e-69(Solanum tuberosum)
STRINGPGSC0003DMT4000883962e-69(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33811041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.16e-14NAC domain containing protein 96