PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA01g07550 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 419aa MW: 47618.3 Da PI: 4.4263 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.5 | 9.6e-18 | 2 | 152 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeek.ew.yfFskrdkkyatgkrknra.............. 77 G+rFhPtd+el+ +L + +++k+l+ + i+e d+yk ePw + +++++ ++ yf ++ +k++ ++k+k+ CA01g07550 2 EEGYRFHPTDSELL-AFLLRFIAEKDLRDDGYITEHDVYKQEPWVTYGcgchcggE-DEGDTsSYrYFITPMHKNKIKKKKKS-Lwddkkkdrfcrivg 97 67************.89999******999889************997446655431.22333233477777666655433222.134555566667776 PP NAM 78 tksgyWkatgkdkevlsk......kgelvglkktLvfykgrapkgektdWvmheyr 127 k g+Wk++ k k+v+ + k+ +g kk+L + ++ + +W+m+ey+ CA01g07550 98 EKLGTWKQKDKGKNVIMTsfgnqsKSLIIGRKKSLCYE-TTRCCPDDGKWLMKEYA 152 679********99998877876544445********97.56666789********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 21.613 | 1 | 177 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-13 | 3 | 152 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.22E-16 | 3 | 177 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence Send to blast |
MEEGYRFHPT DSELLAFLLR FIAEKDLRDD GYITEHDVYK QEPWVTYGCG CHCGGEDEGD 60 TSSYRYFITP MHKNKIKKKK KSLWDDKKKD RFCRIVGEKL GTWKQKDKGK NVIMTSFGNQ 120 SKSLIIGRKK SLCYETTRCC PDDGKWLMKE YAFCEIILNQ FSKSKFRDYV ICAIKRKSQK 180 NSSNGTRCSN RTTIMDTEVE SEVNSVEPLM DLKYNALTPI QVDSMLESEV QIQGAAGEEN 240 NVVLGITTTT QIQEHNDLEI MDISDQDFEM MSPINVAENL MLEFDEFKAK IQEADGEENG 300 VWGIQEFENA SPEINLPNFL DLLSGDADYC STSNHVEIQE AHGEENGQLE LCTSPQIQEP 360 VILDFANLNS QLNMPDFFDT CLNTWVSQNS WIYELISPFD FSKQGTAESN ASGADSRG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 76 | 88 | KKKKKSLWDDKKK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016554312.1 | 0.0 | PREDICTED: NAC domain-containing protein 101-like | ||||
TrEMBL | A0A2G3AFL8 | 0.0 | A0A2G3AFL8_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400090596 | 1e-120 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA14273 | 5 | 7 |