PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA01g05690 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | TCP | ||||||||
Protein Properties | Length: 95aa MW: 10894.3 Da PI: 10.9069 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 22.8 | 2.9e-07 | 55 | 77 | 2 | 24 |
TCP 2 agkkdrhskihTkvggRdRRvRl 24 a kkdrh ki T+ ++R RR+Rl CA01g05690 55 ASKKDRHNKINTAHDPRHRRMRL 77 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 2.2E-6 | 56 | 78 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence Send to blast |
MVEEDSKKLD KQEEEDHEEL VLKSSKNKKD EMSSTTTSTM RRKNNKCATG AGVGASKKDR 60 HNKINTAHDP RHRRMRLTRN SSQILQFARL SRVR* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016567552.1 | 2e-32 | PREDICTED: transcription factor CYCLOIDEA-like | ||||
TrEMBL | A0A2G3AEW9 | 2e-61 | A0A2G3AEW9_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400014572 | 9e-16 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2482 | 22 | 56 |