PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA01g01860 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 235aa MW: 26123.3 Da PI: 7.6131 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.2 | 1.5e-11 | 24 | 64 | 2 | 45 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 ++ GV+ k+ g++ +eIrdp + k+++lg+f+taeeA a CA01g01860 24 HVIGVYKSKSLGKFTSEIRDPI----TkKTIWLGTFDTAEEASHA 64 789*****************72....36**************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 1.2E-5 | 24 | 64 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 12.76 | 24 | 91 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.28E-11 | 25 | 73 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 0.0013 | 27 | 97 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.8E-12 | 27 | 72 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence Send to blast |
MASLDTAGGS GRGKRIESYK RTTHVIGVYK SKSLGKFTSE IRDPITKKTI WLGTFDTAEE 60 ASHAFQSKKL EFQKLVQVKQ KQCTHKQTHF KEDRKSEKSV HAKQEHENLN CGLESVGGPR 120 IDFPMSNTSN GGTDRRINPH ETGIAEDAFH ACLSEKFYSQ SSKEVELQSN MSTDSCAGKN 180 QQGQEDDDKD LWMGKRVQLG DRTVMFSLKL GLPIIDNYGS LLGEFSSLDD LSII* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016566296.1 | 5e-82 | PREDICTED: uncharacterized protein LOC107864446 | ||||
TrEMBL | A0A2G3ADM0 | 1e-169 | A0A2G3ADM0_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400031744 | 1e-81 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA4341 | 12 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28370.1 | 6e-13 | ERF domain protein 11 |