PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g89750
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 172aa    MW: 20347 Da    PI: 10.0553
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g89750genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.14.2e-2431282128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 
                   G+rFhPtdeel+ +yLk+ v +  l+  ++ik + +  ++ePw++    +++ek  yf s+ ++ +++ k+ +r++ +g+Wk + + +++ +   k+
  CA00g89750   3 SLGYRFHPTDEELI-NYLKNFVLHGVLPPRDFIKVAdQFEDLEPWKIM---TGSEKTRYFLSRLKRLKNSTKKFSRTVGKGTWKGQNSGNRIEDGlqKN 97 
                 57************.9**********999999**99456778*****5...5577899********99999***************9999999877688 PP

         NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                 +++g k++L + + ++++ ++ +W+m+ey l
  CA00g89750  98 TTIGYKRSLKYKSDNEKDENNNKWLMKEYFL 128
                 88**********9999999**********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.8732160IPR003441NAC domain
SuperFamilySSF1019416.15E-232133IPR003441NAC domain
PfamPF023656.6E-185127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MLSLGYRFHP TDEELINYLK NFVLHGVLPP RDFIKVADQF EDLEPWKIMT GSEKTRYFLS  60
RLKRLKNSTK KFSRTVGKGT WKGQNSGNRI EDGLQKNTTI GYKRSLKYKS DNEKDENNNK  120
WLMKEYFLRD EYFRKSNKNY AXFGGENTLF SFAIEEIQEF NQKILIPLKM D*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016549492.13e-91PREDICTED: NAC domain-containing protein 78-like
RefseqXP_016549495.12e-90PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A2G2Y5Z32e-95A0A2G2Y5Z3_CAPAN; Uncharacterized protein
STRINGXP_009604942.15e-45(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.13e-14NAC domain containing protein 94