PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA00g89360 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GeBP | ||||||||
Protein Properties | Length: 86aa MW: 9408.01 Da PI: 10.6072 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 32.1 | 3.2e-10 | 2 | 51 | 40 | 97 |
DUF573 40 fvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++k++++++vsksql++Kir LKkKf + v+ g+ p f +fe+s++iWg CA00g89360 2 IIKGKLHADVSKSQLSDKIRMLKKKFMTSVEY---GEVPGFL-----LVFEYSNQIWG 51 689************************99988...8888776.....47888888887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence Send to blast |
MIIKGKLHAD VSKSQLSDKI RMLKKKFMTS VEYGEVPGFL LVFEYSNQIW GAPSNNVVKE 60 NVSNSANGKA KKAVTVVVKK SAEHK* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May act as a transcriptional regulator. Binds specifically to the B-box motif, a promoter element that is required for the tuber-specific and sucrose inducible expression of the patatin gene. {ECO:0000269|PubMed:12028578}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016580681.1 | 2e-27 | PREDICTED: neurofilament heavy polypeptide-like | ||||
Swissprot | Q94IK2 | 4e-25 | STK_SOLTU; STOREKEEPER protein | ||||
TrEMBL | A0A2G2XUM3 | 6e-54 | A0A2G2XUM3_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400067363 | 3e-24 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2369 | 20 | 41 |