PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g71910
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 171aa    MW: 19396.5 Da    PI: 6.3487
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g71910genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.53e-133088563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +r+++NRe+ArrsR RK++ ++ L   v +L +eN++    ++  ++++ ++++e+
  CA00g71910 30 RKRKRMISNRESARRSRMRKQKHLDDLMAQVSTLRKENDQILTSMNVTTQHYLNVEAEN 88
                6789***********************************99999998888888877776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.1E-192690IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.3232891IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-1129105No hitNo description
SuperFamilySSF579591.38E-123082No hitNo description
PfamPF001704.8E-103077IPR004827Basic-leucine zipper domain
CDDcd147024.45E-193181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MASSSGTSSG SSFLQNSGSE EDLQLLMDQR KRKRMISNRE SARRSRMRKQ KHLDDLMAQV  60
STLRKENDQI LTSMNVTTQH YLNVEAENSI LRAQLSELSH RLESLNEIIA YMDANNNNNS  120
CSNGLAMDHN EPYSFNFAQS DTVVDGFNMT NSWNYFCSNQ PIMTAHVLQY *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12950RKRKRMISNRESARRSRMRKQK
24249RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF4303720.0AF430372.1 Capsicum chinense bZIP transcription factor (PPI1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016539772.11e-124PREDICTED: bZIP transcription factor 53-like
SwissprotC0Z2L53e-45BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A1U8DXM51e-122A0A1U8DXM5_CAPAN; Uncharacterized protein
TrEMBLA0A2G2XNL81e-122A0A2G2XNL8_CAPBA; Uncharacterized protein
TrEMBLA0A2G2XWR11e-122A0A2G2XWR1_CAPAN; bZIP transcription factor 53-like
TrEMBLQ8GTZ11e-122Q8GTZ1_CAPCH; BZIP transcription factor
STRINGXP_009802821.18e-94(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA53724123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.13e-44G-box binding factor 6
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]