PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g71840
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 307aa    MW: 34979.8 Da    PI: 5.6135
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g71840genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.5e-11175219549
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                 kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  ++
  CA00g71840 175 KRIKRILANRQSAQRSRVRKLQYISELERSVTTLQAEVSVLSPRV 219
                 899*********************************988776655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-13171235IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.576173225IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.3E-12175226No hitNo description
SuperFamilySSF579591.05E-11175229No hitNo description
PfamPF001708.7E-10175218IPR004827Basic-leucine zipper domain
CDDcd147031.01E-21176226No hitNo description
PROSITE patternPS000360178193IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MAHLPPRVPM PQNWPDFSAH QKTETITTAS HHHNPSWVDE FLDFSSSKRG SHRRSISDSI  60
AFLEAPMVEE CRIRLSSSGA PEFERFDDEQ LMSMFNDDIN AVENNSNPSS PSDHNSIVHE  120
DKKMQLSTDE QQQKQQLLKV EPEEVESSCK SDNEQTAADQ HVNVDTSSEK IVDPKRIKRI  180
LANRQSAQRS RVRKLQYISE LERSVTTLQA EVSVLSPRVA FLDHQRLVLN VDNSVLKQRI  240
AALAQDKIFK DAHQEALKRE IERLREIYYQ QNLKKLENDD DDQPTKTQTA AAADANGSEK  300
KEQLVN*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2103603e-55AC210360.1 Solanum lycopersicum cultivar Heinz 1706 chromosome 7 clone C07HBa0184G23, complete sequence.
GenBankHG9755193e-55HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016580864.10.0PREDICTED: basic leucine zipper 34
SwissprotQ9M2K41e-108BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A2G2WE490.0A0A2G2WE49_CAPBA; Basic leucine zipper 61
TrEMBLA0A2G2Z4240.0A0A2G2Z424_CAPAN; Basic leucine zipper 61
TrEMBLA0A2G3C1590.0A0A2G3C159_CAPCH; Basic leucine zipper 61
STRINGPGSC0003DMT4000242891e-172(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA17752465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-106bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]