PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA00g66680 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 179aa MW: 21076.7 Da PI: 6.0328 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 41.8 | 3.4e-13 | 8 | 134 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevik.evdiykv..ePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 GfrFhPtd e + +L+k +++++++ + +i+ ++d+y++ ePw++ + + + ++++y ++ ++k + + g Wk + + k+v++ CA00g66680 8 SGFRFHPTDTEGL-TFLQKFMAKQEINYSGFITiNIDVYDSeeEPWKIYsRgvpRGA-ADDSLYRYFITKK----------SSNLGNWKLQDEGKPVHR 94 7**********99.9**********9998886526699987558****733443222.3334443333222..........234699**********99 PP NAM 95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ ++g kk + + ++++++ W+m+ey+l CA00g66680 95 DsssSTVVIGYKKKMRYMvnnNEEHREDDGHYWLMKEYKL 134 86555566**********55433444445678******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 16.572 | 6 | 157 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.44E-17 | 6 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.1E-11 | 8 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MEQRVVRSGF RFHPTDTEGL TFLQKFMAKQ EINYSGFITI NIDVYDSEEE PWKIYSRGVP 60 RGAADDSLYR YFITKKSSNL GNWKLQDEGK PVHRDSSSST VVIGYKKKMR YMVNNNEEHR 120 EDDGHYWLMK EYKLSNVMLH QFDDDYRDYV LYAIKKKFIE TCSSEMDNVS EEFGAIQI* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016560607.1 | 6e-62 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A2G2Z713 | 1e-122 | A0A2G2Z713_CAPAN; Uncharacterized protein | ||||
STRING | XP_009631312.1 | 4e-49 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 2e-07 | NAC domain containing protein 38 |