PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA00g36630 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 153aa MW: 17399.1 Da PI: 6.8078 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 30 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIrd ++ng r++lg++ taeeAa+a+++a+ +++g CA00g36630 30 RYRGVRKRP-WGKYAAEIRDINKNG--VRVWLGTYATAEEAARAYDKAAFEMRG 80 8********.**********76676..*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 3.56E-30 | 29 | 89 | No hit | No description |
SMART | SM00380 | 1.4E-36 | 30 | 94 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-23 | 30 | 90 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.4E-14 | 30 | 80 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-30 | 30 | 89 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.894 | 30 | 88 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.4E-11 | 31 | 42 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.4E-11 | 54 | 70 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence Send to blast |
MFKSRNIQQN NMDEDNSNIK NKESGGEEKR YRGVRKRPWG KYAAEIRDIN KNGVRVWLGT 60 YATAEEAARA YDKAAFEMRG RFAVLNFPHE HPSFSSDHSS STSSSYSMAS SSTSHSSVHN 120 AHEVKEVIEF EYFDDKLLED LLGFESDKTK FT* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 1e-32 | 12 | 137 | 1 | 114 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016567930.1 | 1e-101 | PREDICTED: ethylene-responsive transcription factor ERF096-like | ||||
Swissprot | Q9LTC5 | 6e-37 | ERF98_ARATH; Ethylene-responsive transcription factor ERF098 | ||||
TrEMBL | A0A1U8G9W7 | 2e-99 | A0A1U8G9W7_CAPAN; Ethylene-responsive transcription factor | ||||
TrEMBL | A0A2G2ZXM8 | 2e-99 | A0A2G2ZXM8_CAPAN; ethylene-responsive transcription factor ERF096-like | ||||
TrEMBL | A0A2G3CV77 | 2e-99 | A0A2G3CV77_CAPCH; Ethylene-responsive transcription factor | ||||
STRING | XP_009621762.1 | 2e-48 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA21 | 24 | 1165 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 4e-24 | ERF family protein |
Publications ? help Back to Top | |||
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