PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA00g34580

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

GeBP

Protein Properties

Length: 191aa MW: 21921.8 Da PI: 4.2265

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA00g34580	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	32.3	2.8e-10	93	177	12	97
DUF573 12 eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++++L ++df+++ g p+ ++++ + + i ++++s+++l eKi K+ f+k ++ +g++p+++++ d++ f+l++ +Wg CA00g34580 93 DVAILTSILDFNSHCGDIPHPPSLDLINHIMNAIpDLQISREELREKIIVYKENFNKVREV--QGDNPDMDRPIDDEFFDLCMLLWG 177 589****************7777777777776379*******************9..*********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence Send to blast
MIAKKKKTTE RIHIGGDGNV IHQNSKQNGS GNQESEGGDE GEEDTENDDN QEENGDKEED 60 EEERRRRATE KGKKVSKHGE LEFYISYDAN HLDVAILTSI LDFNSHCGDI PHPPSLDLIN 120 HIMNAIPDLQ ISREELREKI IVYKENFNKV REVQGDNPDM DRPIDDEFFD LCMLLWGNQP 180 DDDDDDWIWK *

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009630430.1	6e-24	PREDICTED: ABC transporter F family member 4-like
TrEMBL	A0A2G2Z601	1e-136	A0A2G2Z601_CAPAN; Uncharacterized protein
STRING	PGSC0003DMT400090848	6e-28	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15523	6	7