PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv_021390_wkye.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | MYB_related | ||||||||
Protein Properties | Length: 149aa MW: 17460.1 Da PI: 5.1393 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.4 | 3.2e-08 | 72 | 99 | 2 | 29 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIar 29 ++eE+e+l+++vk++G ++W++I + Bv_021390_wkye.t1 72 SVYSKEEEERLIQGVKRFGCRSWRKIRE 99 6689*********************965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 0.066 | 17 | 67 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 1.29E-7 | 18 | 64 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.3E-8 | 18 | 64 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.0E-7 | 70 | 126 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 6.0E-4 | 70 | 130 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 5.38E-6 | 71 | 129 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.5E-6 | 72 | 100 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.91E-5 | 74 | 124 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence Send to blast |
MDSSATTYSS SDQLKGGRLR WTARDVMNLM MGVSKYGHAW STIIKQYDFR GRNAKAISDK 60 FYSIAGKGDR RSVYSKEEEE RLIQGVKRFG CRSWRKIREL TDEDLAEDQV HPGKRSRLDV 120 EDQYDYHSDR DEDMESEGEM ENDNEDRQQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0J8B0D0 | 1e-105 | A0A0J8B0D0_BETVU; Uncharacterized protein (Fragment) |