PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv_007910_uwzj.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | bHLH | ||||||||
Protein Properties | Length: 250aa MW: 28712.5 Da PI: 5.7297 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.5 | 5e-13 | 57 | 103 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ ++Er RR+++N+++ Lr ++P+ +K++Ka++ + A+ YI++Lq Bv_007910_uwzj.t1 57 SNIAAERCRRKKLNDRLLALRAVVPNI-----TKMDKASTIKDAISYIHELQ 103 56789*********************7.....7******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.097 | 53 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.23E-16 | 57 | 115 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 6.88E-13 | 57 | 107 | No hit | No description |
Pfam | PF00010 | 1.1E-10 | 57 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.4E-16 | 59 | 108 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.0E-14 | 59 | 117 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF55021 | 4.99E-6 | 180 | 246 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 1.0E-4 | 182 | 242 | No hit | No description |
CDD | cd04873 | 0.00367 | 183 | 245 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence Send to blast |
MDTFSEEYQL YWDINKYIQN DELASWELDD DISICNTNHL NLANGGAEKS MTCDDNSNIA 60 AERCRRKKLN DRLLALRAVV PNITKMDKAS TIKDAISYIH ELQEQERRIK EDIANFDRRR 120 CNNNGDNNST SSTIDFEQEF SFLSNKNSTD HDRQQYDFNN CCRSSIIDDL KITVSYVGGR 180 IVIVSLSCVN KKGILVKLCE MLESLKLKVT TAHITVVGPK ILKTVYVEAD EQEKDHLRKK 240 IEMAISSLRM |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010667302.1 | 0.0 | PREDICTED: transcription factor bHLH35 isoform X1 | ||||
TrEMBL | A0A0J8B2X1 | 0.0 | A0A0J8B2X1_BETVU; Uncharacterized protein | ||||
STRING | XP_010667302.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 6e-48 | bHLH family protein |