PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv_005360_xxys.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | bZIP | ||||||||
Protein Properties | Length: 194aa MW: 21854.3 Da PI: 7.1482 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.7 | 3.4e-15 | 126 | 171 | 6 | 51 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 r +r++kNRe+A rsR+R++a++ +Le++ +eL++eN +L+k+ e Bv_005360_xxys.t1 126 RHKRMMKNRESAARSRARRQAYTTQLEREHAELKEENAKLRKQQEL 171 89***************************************98765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-7 | 118 | 189 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.56E-10 | 126 | 172 | No hit | No description |
PROSITE profile | PS50217 | 10.404 | 126 | 172 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.3E-14 | 126 | 172 | No hit | No description |
Pfam | PF00170 | 1.3E-12 | 126 | 171 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 128 | 143 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MEELWKSTHQ SSFQDFLARA PISLSMNDPK DHKARHDDDD DDDDVVVDDN NDDGDGHEKI 60 GMFKKEFLTR SGFTSSLNSP FEALATVAAS SSAVSLLNTG TCFPITKKRL SDDQTVFDAE 120 LGGNPRHKRM MKNRESAARS RARRQAYTTQ LEREHAELKE ENAKLRKQQE LLLVSAPANV 180 PKKRTRSRSC TAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010666912.1 | 1e-143 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2 | ||||
Swissprot | Q84JK2 | 3e-21 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A0J8B3L2 | 1e-141 | A0A0J8B3L2_BETVU; Uncharacterized protein | ||||
STRING | XP_010666911.1 | 1e-123 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-15 | bZIP family protein |