PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv9_221290_hwtg.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

bHLH

Protein Properties

Length: 384aa MW: 41768.7 Da PI: 6.716

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv9_221290_hwtg.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00049	248	286	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq Bv9_221290_hwtg.t1 248 RKEKLGDRITSLHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 286 6677889999999999998.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	11.534	236	285	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	7.46E-10	246	297	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	8.7E-7	246	294	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.08E-5	246	290	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence Send to blast
MHSNLRSPTS TNDQHQQQQH EGEVVPTNNF LMSQTHPSNS LLPLQFLHGG SSSSSSSSSL 60 LPYINSAEPH AQDFPHSWSQ LLLGGLGSEQ EDRFSPSDQY EATRGMNGGV QVDVKQELSN 120 QSNNNNNNNN NNINLQLYGN HQFHEDQQDV SVGISSRGVA TSSAAWTHQI MPASLSPKSC 180 ITSLSSNNNN NNNNMLDFST NKRSLLADQS HQHADHTTNS ECNSTATGGV PPKKPRLQSS 240 STPPLKVRKE KLGDRITSLH QLVSPFGKTD TASVLLEAIG YIRFLQGQIE ALSSPYLGNN 300 NTSAKNNNQH FVHGERNCLF PDDPGQLLND SCLKRRGAAN LEDNIKGALK DLKSRGLCLV 360 PISCTQLVGS DNGADYWAQS LGGF

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence Send to blast

MHSNLRSPTS TNDQHQQQQH EGEVVPTNNF LMSQTHPSNS LLPLQFLHGG SSSSSSSSSL  60
LPYINSAEPH AQDFPHSWSQ LLLGGLGSEQ EDRFSPSDQY EATRGMNGGV QVDVKQELSN  120
QSNNNNNNNN NNINLQLYGN HQFHEDQQDV SVGISSRGVA TSSAAWTHQI MPASLSPKSC  180
ITSLSSNNNN NNNNMLDFST NKRSLLADQS HQHADHTTNS ECNSTATGGV PPKKPRLQSS  240
STPPLKVRKE KLGDRITSLH QLVSPFGKTD TASVLLEAIG YIRFLQGQIE ALSSPYLGNN  300
NTSAKNNNQH FVHGERNCLF PDDPGQLLND SCLKRRGAAN LEDNIKGALK DLKSRGLCLV  360
PISCTQLVGS DNGADYWAQS LGGF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010691374.1	0.0	PREDICTED: transcription factor bHLH68-like
TrEMBL	A0A0K9RUD3	1e-170	A0A0K9RUD3_SPIOL; Uncharacterized protein
STRING	XP_010691374.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	2e-70	bHLH family protein