PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_206260_kpua.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family SAP
Protein Properties Length: 505aa    MW: 55024.1 Da    PI: 6.8379
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_206260_kpua.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP561.62.6e-1713150522454
                 SAP  22 gdass.......................gesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqvcstwravsrs 89 
                          +++s                        ++e+++s+      +vwpePf+e+la q+a+d+s s+Grla a++la++fqvc+twravsrs
  Bv9_206260_kpua.t1  31 NGSGSsrsrrqrrrrpqtptpspqvvviTSQEASTSTYYNLNGGVWPEPFVESLALQLALDTSLSHGRLAVAPTLAILFQVCTTWRAVSRS 121
                         22222556777777777777778888888889999998889999*********************************************** PP

                 SAP  90 dllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdp......advdedndada..lsCrclalsdkylaaGfadGav 172
                         +llwq+l r +W+ t+l   tWree+iy h t+rnfr  rysy +l+ ++      +  d+   ad+  l+C +l l+  +la+Gf+dG+v
  Bv9_206260_kpua.t1 122 ELLWQNLVRIVWNSTDLHLPTWREEFIYLHSTSRNFRVSRYSYYVLRPSDhllaaaPGGDDGGAADQlpLLCLRLVLAGDHLAVGFSDGSV 212
                         *******************************************9886433111111223343444442379******************** PP

                 SAP 173 rlfdletrlhvstflpqhrdrlGrfsravsGivis..dsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGly 261
                         r+f+l +rlh++t++p  rd+lG fsravsGiv++    r+vfa+ldGdihva   g g ++arra+lGdvvndGalvdf+G gr+wvGly
  Bv9_206260_kpua.t1 213 RIFHLPSRLHLQTIHPLLRDHLGLFSRAVSGIVLQplADRVVFASLDGDIHVASPLG-GPTSARRAYLGDVVNDGALVDFTGGGRFWVGLY 302
                         **********************************843579*************9877.899****************************** PP

                 SAP 262 aGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmltel..telvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeerrGlivssl 350
                         aGvpGraf++Wda++eel f+GGsltdPe+vmGWhmlte+  te+vGr+rv+++  av  tslr +v+dl  +  v++ee +rrG+iv+s+
  Bv9_206260_kpua.t1 303 AGVPGRAFRVWDADSEELLFMGGSLTDPESVMGWHMLTEIrpTEFVGRIRVASQGLAVGVTSLRALVLDLEQHVEVIGEETSRRGIIVGSV 393
                         ****************************************666******************************99**************** PP

                 SAP 351 dasneayvvvdsrGvatvrrvenleevcrfrvrg.........aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalv 432
                         da+++a+v+vd+rG+a+vr+  +lee++rf+v+            rg+lgC+n+ y++++agg +rvW+  + e ylyslre v+e+ al 
  Bv9_206260_kpua.t1 394 DANDDAFVMVDTRGTASVRQLRTLEEMSRFSVSHrggggapsvPLRGMLGCINNMYVMMCAGGTIRVWDAAQGE-YLYSLREWVEEATALA 483
                         ********************************84434444444579************************9976.**************** PP

                 SAP 433 addrhvavsssdgtihlldfga 454
                         addrh+ ++ssd+tih++d+ga
  Bv9_206260_kpua.t1 484 ADDRHIVATSSDSTIHMWDYGA 505
                         ********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.1280.501.3E-4103161No hitNo description
SuperFamilySSF813831.72E-6103153IPR001810F-box domain
SMARTSM0032016170216IPR001680WD40 repeat
Gene3DG3DSA:2.130.10.104.5E-14191330IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509782.75E-17192328IPR017986WD40-repeat-containing domain
SuperFamilySSF509782.75E-17385502IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.104.5E-14388503IPR015943WD40/YVTN repeat-like-containing domain
SMARTSM00320180410462IPR001680WD40 repeat
PROSITE profilePS5029410.179456505IPR017986WD40-repeat-containing domain
SMARTSM003203.4465502IPR001680WD40 repeat
PROSITE profilePS500828.771485505IPR001680WD40 repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 505 aa     Download sequence    Send to blast
MSSPPPSHVG EASTSRQRSR NGNNGNGNNG NGSGSSRSRR QRRRRPQTPT PSPQVVVITS  60
QEASTSTYYN LNGGVWPEPF VESLALQLAL DTSLSHGRLA VAPTLAILFQ VCTTWRAVSR  120
SELLWQNLVR IVWNSTDLHL PTWREEFIYL HSTSRNFRVS RYSYYVLRPS DHLLAAAPGG  180
DDGGAADQLP LLCLRLVLAG DHLAVGFSDG SVRIFHLPSR LHLQTIHPLL RDHLGLFSRA  240
VSGIVLQPLA DRVVFASLDG DIHVASPLGG PTSARRAYLG DVVNDGALVD FTGGGRFWVG  300
LYAGVPGRAF RVWDADSEEL LFMGGSLTDP ESVMGWHMLT EIRPTEFVGR IRVASQGLAV  360
GVTSLRALVL DLEQHVEVIG EETSRRGIIV GSVDANDDAF VMVDTRGTAS VRQLRTLEEM  420
SRFSVSHRGG GGAPSVPLRG MLGCINNMYV MMCAGGTIRV WDAAQGEYLY SLREWVEEAT  480
ALAADDRHIV ATSSDSTIHM WDYGA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13843RRQRRR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689285.10.0PREDICTED: transcriptional regulator STERILE APETALA
SwissprotQ9FKH11e-140SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLA0A0J8BLF10.0A0A0J8BLF1_BETVU; Uncharacterized protein
STRINGXP_010689285.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-141SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]