PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv9_205380_pzcg.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family TALE
Protein Properties Length: 637aa    MW: 71431 Da    PI: 7.9286
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv9_205380_pzcg.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.65.7e-104534852254
                         SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         ++yp+ ++++ LA+++gLt +qV++WF N R +
  Bv9_205380_pzcg.t1 453 HPYPTDNDKQMLATQTGLTRNQVSNWFINARVR 485
                         89*****************************88 PP
2BELL96.42.5e-31308376472
                BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         + +++kakLl+++eeV+kr kqy++q+q+vis+F+ v gl +a+pY+s  lk+iSrhFrcLk+aia+q+
  Bv9_205380_pzcg.t1 308 DCHERKAKLLHMQEEVCKRQKQYHQQMQMVISAFDSVPGLSNATPYISRSLKTISRHFRCLKNAIADQL 376
                         6789***************************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.1E-41238374IPR006563POX domain
PfamPF075263.3E-34243373IPR006563POX domain
PROSITE profilePS5007112.147426489IPR001356Homeobox domain
CDDcd000861.34E-11429490No hitNo description
SMARTSM003892.5E-10429493IPR001356Homeobox domain
SuperFamilySSF466894.28E-17431495IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-28432493IPR009057Homeodomain-like
PfamPF059202.7E-18446485IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0010229Biological Processinflorescence development
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MEMSNDFFPE LHVAQQRRRD KLRVQHLEEL QANNFHNHNT SPMVLVPPDM LNFTGSQSSS  60
PFPNIHPTRF IAPASSDPCE NWVPNYNGNE TSHVEHDGSR RHHLSSIMLP QFLAHHNETS  120
EINYQNNVQS WGNGGNELPL LPGNFVSQPN NVIDASSQSH VLSLSLSSNQ ICEYQHLGDP  180
RELKPLESGS IASVVKQSMS NSGNNNNNKL ECGNNLVQDV AGSSILVHRN VGPLGPFTGY  240
ASILKSSKFL KPAQLLLDEF FGAAGLCRGG EEVEVRDMAE CSSAVASKIR ESNDLSARNY  300
SCESYRPDCH ERKAKLLHMQ EEVCKRQKQY HQQMQMVISA FDSVPGLSNA TPYISRSLKT  360
ISRHFRCLKN AIADQLKHIK RALGEDLSSP TSFLKGDSSS SMRYDQSFTK VKSGAFGGTG  420
HVGHQSHVWR PQRGLPERAV SILRAWLFDH FLHPYPTDND KQMLATQTGL TRNQVSNWFI  480
NARVRLWKPM VEEIHTLETK GSSRSELNSN NSVMSVIAKN QQAAVANEPD CKLPQNLACD  540
KQLVPSSSLE RSRGDTKTEH LFQKCSRIEN NHQVPSNMDS SYIDFLPYQR WRLEQGGIGA  600
VSLTLGLRHG SETTNPQLQH QFLPQGPRDA FWRSCYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-16435493563Homeobox protein Meis2
3k2a_B3e-16435493563Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010689104.10.0PREDICTED: BEL1-like homeodomain protein 9
TrEMBLA0A0K9QCS30.0A0A0K9QCS3_SPIOL; Uncharacterized protein
STRINGXP_010689104.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.11e-86BEL1-like homeodomain 8