PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_186660_wsdu.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family GeBP
Protein Properties Length: 394aa    MW: 42926 Da    PI: 6.1482
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_186660_wsdu.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57398.27.6e-31154243197
              DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                         klfqr++se+Dei +L+G+i+++ak++++p++d+d+fy f+kks++++v+k q+v+K+rrL+kKf++ +k+       ++++ h+ ++fel
  Bv8_186660_wsdu.t1 154 KLFQRVFSEDDEIEILKGMIEYRAKKKADPMNDVDDFYGFIKKSVHADVNKGQMVDKVRRLRKKFQNAKKR-------KLTNLHEIQAFEL 237
                         579*****************************************************************999.......99*********** PP

              DUF573  92 skkiWg 97 
                         skkiW+
  Bv8_186660_wsdu.t1 238 SKKIWE 243
                         *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.1E-27156243IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARSKGPKPL AEAPPEPESS DEEEASRSSS TELEEDALSS SDSDDEQQQQ QPPPSTPPPP  60
PSAAKKLPTS ALATTKPKPV LEHSSSSDDD DDDQPLPKLK TFSSPKPRSK TTVSGPASEK  120
RPSESEDKGP SKRPKKEKSG PTTPAAAQEE GSKKLFQRVF SEDDEIEILK GMIEYRAKKK  180
ADPMNDVDDF YGFIKKSVHA DVNKGQMVDK VRRLRKKFQN AKKRKLTNLH EIQAFELSKK  240
IWESNVAADD AGVAEEKASN GVLEVNNNTG PGAGAVAAKS NTKPRSVKSK TGAGAVTVAV  300
TGNADDKKSN VEEEEGVKGV KMIEGVQKEE DVEVGEAVSM DRIRKEGFKK MGAKARAEIN  360
AMWDKVALAR LKMEMLQHEA QEEESRRIME ALGH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211225RRLRKKFQNAKKRKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010686932.10.0PREDICTED: probable transcription factor At4g00390
TrEMBLA0A0K9Q6Q32e-86A0A0K9Q6Q3_SPIOL; Uncharacterized protein (Fragment)
STRINGXP_010686932.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.13e-21DNA-binding storekeeper protein-related transcriptional regulator