PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv8_184380_zguo.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family Trihelix
Protein Properties Length: 400aa    MW: 45201 Da    PI: 6.6149
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv8_184380_zguo.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix90.42e-28289373186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         rW+ +ev+aLi++r  +++++r+  +k+p Weevs+ m++ g+ rs+k+Ckekwen+nk+ykk + + kk  se+ ++cpyf++le
  Bv8_184380_zguo.t1 289 RWPTSEVQALITLRAALDDKFRTLGAKAPVWEEVSAGMAKMGYVRSAKKCKEKWENVNKYYKKATGSGKKP-SENAKSCPYFHELE 373
                         8***************************************************************9999986.78888*******98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.829282346IPR017877Myb-like domain
CDDcd122032.81E-26288353No hitNo description
PfamPF138377.5E-21288374No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MEELFSTDRP LPVAGFPEEL TPFPDPEPQP HSSSTVGFFY PQSTPLISSP APQKLRPIRS  60
NGKNPPEYSA SDDALLRING CNSSELGFLQ FQSNLGENGG NFRLPEKLED DTSADALLQM  120
KSEMDAHLIS NFKSQISHLN FSFSSSSDCS GESEHKVEEP SSSGRPRKKR RKRMELFLEN  180
LMSQVIHKQE QMHYQLMDMI EKKEKERITR EEAWHQREME RAKRAEQIRA QEAARSLALI  240
SFIRNALGVT DIQVPELLSL PPVFSGEEIG DPQMLGQGEL DKFDPNNKRW PTSEVQALIT  300
LRAALDDKFR TLGAKAPVWE EVSAGMAKMG YVRSAKKCKE KWENVNKYYK KATGSGKKPS  360
ENAKSCPYFH ELETLYRNRL ITAAKAHSPS NEDPEQNGIL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166172RKKRRKR
2167171KKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00552DAPTransfer from AT5G47660Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010686620.10.0PREDICTED: trihelix transcription factor GT-2
TrEMBLA0A0K9RK770.0A0A0K9RK77_SPIOL; Uncharacterized protein
STRINGXP_010686620.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47660.11e-34Trihelix family protein