PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv8_182380_cpjk.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | VOZ | ||||||||
Protein Properties | Length: 485aa MW: 54287 Da PI: 5.538 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 440.3 | 2.4e-135 | 208 | 424 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwn 91 ppp+aflgpkcalwdc+rpaqgs+w+qdycssfha+lalneg+pg++pvlrp+gi+lkdgllfaalsakvqgk+vgipecegaatakspwn Bv8_182380_cpjk.t1 208 PPPAAFLGPKCALWDCPRPAQGSDWWQDYCSSFHASLALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKVQGKDVGIPECEGAATAKSPWN 298 89***************************************************************************************** PP VOZ 92 aaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalal 182 a+elfdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm ef+glkrsyymdpqp++++ewhlyeyein++d +al Bv8_182380_cpjk.t1 299 APELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMDEFSGLKRSYYMDPQPLNNYEWHLYEYEINKCDVCAL 389 ******************************************************************************************* PP VOZ 183 yrlelklvdekksakgkvskdsladlqkklgrlta 217 yrlelklvd kk+++gk ++ds+++lqk++grl+a Bv8_182380_cpjk.t1 390 YRLELKLVDRKKTPRGKTANDSVSELQKQMGRLSA 424 *********************************97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 485 aa Download sequence Send to blast |
MRKGLKRNGC KSVSHQLFKD RAKNRVDDLQ MIFSDLQSAR KDSRTVDAAV LEEQVYLMLR 60 EWKSELNEPS PASSLQNDSL GTFSSDIYRL LHLCDEEDDA TSPFELPLPK PEPDVQKCQV 120 GDAIGFLEGP DIKPGSQEQN FSPVDQCKGA PGFRSSTATN LEMANQLDYN QYNLHLDLEN 180 HYFGGYNGVD VGALYANPIS GFMPNVCPPP AAFLGPKCAL WDCPRPAQGS DWWQDYCSSF 240 HASLALNEGP PGMSPVLRPG GIGLKDGLLF AALSAKVQGK DVGIPECEGA ATAKSPWNAP 300 ELFDLSVLEG ETIREWLFFD KPRRAFESGN RKQRSLPDYS GRGWHESRKQ VMDEFSGLKR 360 SYYMDPQPLN NYEWHLYEYE INKCDVCALY RLELKLVDRK KTPRGKTAND SVSELQKQMG 420 RLSAEFPLDG RRPLKGRTKF NSKDGVGNLH SDPTQLITAD KTSFDHGVGA PYGYLVENLG 480 DYYLK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010686387.1 | 0.0 | PREDICTED: transcription factor VOZ1 | ||||
Refseq | XP_019106652.1 | 0.0 | PREDICTED: transcription factor VOZ1 | ||||
Swissprot | Q9SGQ0 | 0.0 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A0K9QIS6 | 0.0 | A0A0K9QIS6_SPIOL; Uncharacterized protein | ||||
STRING | XP_010686387.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 0.0 | vascular plant one zinc finger protein |
Publications ? help Back to Top | |||
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