PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv7_161720_aoyz.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

MYB_related

Protein Properties

Length: 793aa MW: 87890.4 Da PI: 6.9516

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv7_161720_aoyz.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23	1.8e-07	52	94	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT eE+e + a +q G++ +++I +++ + q++++++ + Bv7_161720_aoyz.t1 52 AWTREEEESFFTALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 94 6***************99.*****.*********976 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	6.8E-10	45	99	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	3.3E-5	47	97	IPR009057	Homeodomain-like
PROSITE profile	PS51293	12.289	48	99	IPR017884	SANT domain
SMART	SM00717	7.2E-5	49	97	IPR001005	SANT/Myb domain
CDD	cd00167	3.27E-5	52	95	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence Send to blast
MQATEKTSLP CFEHHFSDTN VGHNEEPAVI PSSSDDIVTS QPAKRPTRQW AAWTREEEES 60 FFTALRQVGK NFEKITCRVQ SKNKDQVRHY YYRLVRRMNK LLGPDLSLDA KNSKDTNAAM 120 LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLTKDRK KNVNKRMPLG ENYSPPSSTT 180 TSNQIKLSGN DARAVKIVVV DSQNVQKAGQ GRGSSARRNP NMGVIRSISK GESSHPKPPR 240 QRRKTGAASA AAMKRWEKAA MAGVSLVADA AEHLERTAEQ IDSGPSMQVQ GNSPNLSKGI 300 AVEDNLQPIL KLKLQLFPID ESTRKALEMD KHNPHLELTL SSRKKISSIL EHLDRKWGTS 360 SVASGELMLF PFSIQRENLL GYQRWSRESV VTAAEVYSMI GSPLVFRLRY GWISSNELQS 420 GSSQTISVAS SHYSEQENRR NQTLMEQLCP PTEVEDKLEK LVDHMLSEHQ TSDKQNSSLK 480 ESTAATSGEA NKNSDIDFHN DAFEMQNLVS SVFSKRIEAC VDSTLTNMKN VVGQRAIKNP 540 SWSTREWADR VTNATAGKQS TEVSDVMDVD CNETHFKDTE HVEEIPFTCD SFDAAIAAHI 600 ISQSKIGFAG PSPHLSSIWD AEETCDAFSF QNRVVSNQVP TSASAAASIA GAGPFRTNLA 660 GTSTKVQDSQ DRMMAENDVL VDTINECRSD AHEIESSAKD FSSLTDIYWP DSLGPLELDV 720 PSCKYYSEDL ILSDSLSGLN RLLASSLDAF QNCSFFGLDE KRPPSPATGT QGGATFAGKI 780 GPRDSAGVQS LQV

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence Send to blast

MQATEKTSLP CFEHHFSDTN VGHNEEPAVI PSSSDDIVTS QPAKRPTRQW AAWTREEEES  60
FFTALRQVGK NFEKITCRVQ SKNKDQVRHY YYRLVRRMNK LLGPDLSLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFIEA LEHQLTKDRK KNVNKRMPLG ENYSPPSSTT  180
TSNQIKLSGN DARAVKIVVV DSQNVQKAGQ GRGSSARRNP NMGVIRSISK GESSHPKPPR  240
QRRKTGAASA AAMKRWEKAA MAGVSLVADA AEHLERTAEQ IDSGPSMQVQ GNSPNLSKGI  300
AVEDNLQPIL KLKLQLFPID ESTRKALEMD KHNPHLELTL SSRKKISSIL EHLDRKWGTS  360
SVASGELMLF PFSIQRENLL GYQRWSRESV VTAAEVYSMI GSPLVFRLRY GWISSNELQS  420
GSSQTISVAS SHYSEQENRR NQTLMEQLCP PTEVEDKLEK LVDHMLSEHQ TSDKQNSSLK  480
ESTAATSGEA NKNSDIDFHN DAFEMQNLVS SVFSKRIEAC VDSTLTNMKN VVGQRAIKNP  540
SWSTREWADR VTNATAGKQS TEVSDVMDVD CNETHFKDTE HVEEIPFTCD SFDAAIAAHI  600
ISQSKIGFAG PSPHLSSIWD AEETCDAFSF QNRVVSNQVP TSASAAASIA GAGPFRTNLA  660
GTSTKVQDSQ DRMMAENDVL VDTINECRSD AHEIESSAKD FSSLTDIYWP DSLGPLELDV  720
PSCKYYSEDL ILSDSLSGLN RLLASSLDAF QNCSFFGLDE KRPPSPATGT QGGATFAGKI  780
GPRDSAGVQS LQV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010684064.1	0.0	PREDICTED: TSL-kinase interacting protein 1
Refseq	XP_010684065.1	0.0	PREDICTED: TSL-kinase interacting protein 1
Swissprot	Q8LJT8	0.0	TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBL	A0A0K9RSF6	0.0	A0A0K9RSF6_SPIOL; Uncharacterized protein
STRING	XP_010684064.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36960.1	0.0	TSL-kinase interacting protein 1