PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv7_160700_mwox.t1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family Trihelix
Protein Properties Length: 523aa    MW: 59187.5 Da    PI: 6.6388
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv7_160700_mwox.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix74.41.8e-23150259186
            trihelix   1 rWtkqevlaLiearremeerlrrgk.......................lkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                         +Wt+++v++Li a+ +++++ +++                        +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ 
  Bv7_160700_mwox.t1 150 KWTDNMVRLLIMAVYYIGDEGGAEIgsdkkkpgsggggggggggagllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDIL 240
                         7**************99999997422345778899999999************************************************** PP

            trihelix  69 kkr.tsessstcpyfdqle 86 
                         +k+ +++++++  ++d+++
  Bv7_160700_mwox.t1 241 GKGtACRVVENQTLLDSMD 259
                         ***559********99997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-20148284No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    Send to blast
MEGSGFSGRM YSNTGVGMLG LEIPLNQQQQ QSQQQQQQQQ QHSQQQHLQK HPHMVAFTNN  60
HHKQHQQHEQ QTQLSMKQPT NYLSSYNNPN SNPNTNPTQN QNPGLKIKTQ MTHLTNSDED  120
EPGCANDHEN SSVDDKSKGG TNVSPWHRMK WTDNMVRLLI MAVYYIGDEG GAEIGSDKKK  180
PGSGGGGGGG GGGAGLLQKK GKWKSVSRAM MEKGFYVSPQ QCEDKFNDLN KRYKRVNDIL  240
GKGTACRVVE NQTLLDSMDV TPKLKEEVRK LLNSKHLFFR EMCAYHNSCG YGAGGHGSDP  300
GAAAAAVTVA EQPQSQPQHI QHNNPLHHHH HQHQQQMPMP KQQQQSCSHS ATMSQSSMDP  360
NSSHKLGLGL EDHDEDDDDD DEDDEDEYYE EDEEQDEGGQ RKKAKTVVGD SSNNNSHALQ  420
KLNGEIMGML QDGSKSSREK KQWMMTQLVQ LEEQGLKFQF QALELEKQRW RWIKFSSKKE  480
REMEKMKIDN ERKRLETERM MLLLRQKEME VLVEPSNPSC VSS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010683922.10.0PREDICTED: AF4/FMR2 family member 4
TrEMBLA0A2C9VCP21e-136A0A2C9VCP2_MANES; Uncharacterized protein
STRINGXP_010683922.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.14e-62sequence-specific DNA binding transcription factors