PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Bv6_149850_ejzf.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 207aa MW: 23787.6 Da PI: 8.2262 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.7 | 2.8e-10 | 135 | 201 | 26 | 89 |
T..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 26 h..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 h ++++++++ l +ed e+ ++W ++++y +++s+ + l+ G+++F + +g+k+gD +v++ d+ ++ Bv6_149850_ejzf.t1 135 HlpSIESRQGVRLYMEDkETRETWCFRFRYriTNNSKVHSLE-GTRQFLQVHGMKAGDYIVIYKDD-ER 201 366566779999*****66669******99888888889999.*******************9433.43 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF81995 | 1.86E-6 | 67 | 115 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 1.7E-9 | 131 | 204 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.63E-7 | 131 | 205 | IPR015300 | DNA-binding pseudobarrel domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 207 aa Download sequence Send to blast |
MIPGGFRGNT AGFKPLSSPE VQGDSDCVGG GALGGSPIMS CGNSWVWPPP KIKNYDEGTC 60 SCVVSQIQQQ QQQQQQQQQQ QQQQQQQQIQ QQQQQKLRIL SFNSLMIPST DHHHSEIHSS 120 FIPPPVYHPR DAEIHLPSIE SRQGVRLYME DKETRETWCF RFRYRITNNS KVHSLEGTRQ 180 FLQVHGMKAG DYIVIYKDDE RRRYVSS |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j9b_A | 5e-16 | 130 | 205 | 25 | 100 | B3 domain-containing transcription factor FUS3 |
6j9b_D | 5e-16 | 130 | 205 | 25 | 100 | B3 domain-containing transcription factor FUS3 |
Search in ModeBase |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G26790.1 | 9e-17 | B3 family protein |