PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv6_141490_ncmt.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | bHLH | ||||||||
Protein Properties | Length: 257aa MW: 29046.5 Da PI: 5.2041 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.8 | 4.4e-09 | 147 | 194 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR+riN+++ L++l+P + k + a +L ++Y++sLq Bv6_141490_ncmt.t1 147 SHSLAERVRRERINEKLKVLQDLVPGC----YKTMGMAVMLDVIINYVRSLQ 194 8*************************8....355888888999999988887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 7.26E-12 | 141 | 198 | No hit | No description |
SuperFamily | SSF47459 | 8.64E-17 | 141 | 212 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.497 | 143 | 193 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.5E-16 | 143 | 205 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.5E-6 | 147 | 194 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.0E-8 | 149 | 199 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:2000488 | Biological Process | positive regulation of brassinosteroid biosynthetic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MEEFRNDIQK VLKPTAAFSQ LNSNMELFTS FSELNQPLSS HILDYFSSNN VINNADTNQP 60 PYSNEQLEFT FVEDSAIAHS LLCVSDQTHS TAVQLSSDFG SEAGPNNRID QNNSTTGKKR 120 KRKDEVEVEK PKDVIHVRAK RGQATDSHSL AERVRRERIN EKLKVLQDLV PGCYKTMGMA 180 VMLDVIINYV RSLQNQIEFL SMKLSAASMF YDFNSPEAEA IETLQRTTNP CDAEETERVA 240 KEGYGGMLPK LHSSWPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 117 | 122 | KKRKRK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010681492.1 | 0.0 | PREDICTED: transcription factor bHLH75 | ||||
Swissprot | A4D998 | 1e-56 | BH075_ARATH; Transcription factor bHLH75 | ||||
TrEMBL | A0A0K9QPE7 | 1e-106 | A0A0K9QPE7_SPIOL; Uncharacterized protein | ||||
STRING | XP_010681492.1 | 0.0 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25330.1 | 7e-54 | bHLH family protein |
Publications ? help Back to Top | |||
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