PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Bv6_134230_aref.t1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
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Family | bZIP | ||||||||
Protein Properties | Length: 240aa MW: 26691.8 Da PI: 9.8933 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.9 | 8.1e-17 | 170 | 218 | 4 | 52 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++r +r++kNRe+A rsR+RK+a+i eLe +v +L++eN +L+k+ + Bv6_134230_aref.t1 170 DRRFKRMIKNRESAARSRARKQAYISELELEVVQLTKENAMLRKQQRQF 218 6899***************************************987664 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-14 | 167 | 231 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.76 | 169 | 221 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.2E-15 | 171 | 221 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.1E-15 | 171 | 223 | No hit | No description |
CDD | cd14707 | 1.33E-24 | 171 | 225 | No hit | No description |
SuperFamily | SSF57959 | 3.31E-12 | 171 | 222 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 174 | 189 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence Send to blast |
MTSTESRSLS SSSSSSPSPS PFSPCFSLHQ PNKTMEEVWK DITMNSLPNT PIPHIHTIHH 60 PTPTSHFKGM ILQDFLNASG AGDSRINSIR SSSSSSSPLY SPPPPPPPPP PTEFQFFDSE 120 RFQIQRNSPV SNFIAFDNSL AASFGVAADD VVTGINKKRF CQGDEDASGD RRFKRMIKNR 180 ESAARSRARK QAYISELELE VVQLTKENAM LRKQQRQFIE ETSAQLPKKH GLHRTSTASF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010680407.1 | 1e-176 | PREDICTED: protein FD isoform X1 | ||||
TrEMBL | A0A0K9RCJ3 | 3e-55 | A0A0K9RCJ3_SPIOL; Uncharacterized protein | ||||
STRING | XP_010680407.1 | 1e-176 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 2e-27 | bZIP family protein |