PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv3_067330_geyj.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

Trihelix

Protein Properties

Length: 969aa MW: 108527 Da PI: 6.347

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv3_067330_geyj.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.5	8.3e-09	183	237	22	76
trihelix 22 rrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 +rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e++++ e++ Bv3_067330_geyj.t1 183 GRGKTRAEKDREVAEFLNKHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQV 237 6788999999**************************************9965554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00180	2.71E-11	761	953	No hit	No description
SuperFamily	SSF56112	2.08E-14	766	952	IPR011009	Protein kinase-like domain
Gene3D	G3DSA:1.10.510.10	4.1E-6	807	957	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 969 aa Download sequence Send to blast
MSDYGYGYGY GYENGIAYSS ITPTNYPALP YYYPSVSYFD DGEASVAGGG DGGGCGGGGG 60 FYVGMVENPL KEVTRTYKAR HQSPMGLGIG LQESSPSPSN PQAQLTSPDS SSSPSLSPIP 120 SSSAAGQEQP QQQLRKGKYV SPVWKPHEML WLAKGWRAQY QGESPGSHSS FGLECGGGGG 180 GGGRGKTRAE KDREVAEFLN KHGVNRDAKT AGTKWDNMLG EFRKVYEWER GGEREQVGKT 240 YFRLSPYERK IHRLPASFDE QVFEELSQFM GPKMRHSPTT SFHHLQTSRS LSAPCDLNLK 300 ALPPPYPFKD DNYPLSSMFS DRARQMQSYL TNNPRNPLLG IDPQSSSLNV GVSTSGGTPR 360 VELRRIGRMR MTWEEWVSLW AEEGEYHRGR VKVQGCNFLN ADELIYFDDT MVASSLEAFG 420 DGPLKGFSVD CFTPGQQLKV FGRRKLSSSS SSPSLPLPSS SDFNERIPFA MAAEPSIRWE 480 FQDPTEYYLG CLRAPTTTLP TLFELSWYIQ EPPPEEFRLP LRKDIYRDLP QGRELFFTTS 540 SSEPLDCKSF TIDILSSLIR SIPSITTSNS SSRDSYIALW DDCINRVISK FCPFEIMFTR 600 KQSSKSSSDE SFGDQWPNLT GMVKNLCLWR GEETDQLRES QPFIDPSSSI TKKMSWTYNG 660 IPYVLGYYAI GHNITFCALS PSDSSSQESR ITRTDVYSLD LSNPSERIKL LVPCWRIGIL 720 LASLAEKCIK NHCQSDYERQ DLGDGNIIEM TTKTTTRFYL NKRRWQTTKE IYSVLDQRVV 780 PHVEHLISYN EDELALVFKP RGVKTKPKNM EQLVLALKQV AKALVALHDL SFMHRDLSWD 840 KVLMIMEVNK EDEASSSTEE WFVAGFEEAV GAPQINPVAM AVAVVEEREK YAAEMGRGVH 900 GVKVDVWGIG YLIKTSEVRY EGIVGKQVKE LEGKCMEINP EQRPTAADCY HHLLQIQSSL 960 SSAASTRCS

Sequence ? help Back to Top

Protein Sequence Length: 969 aa Download sequence Send to blast

MSDYGYGYGY GYENGIAYSS ITPTNYPALP YYYPSVSYFD DGEASVAGGG DGGGCGGGGG  60
FYVGMVENPL KEVTRTYKAR HQSPMGLGIG LQESSPSPSN PQAQLTSPDS SSSPSLSPIP  120
SSSAAGQEQP QQQLRKGKYV SPVWKPHEML WLAKGWRAQY QGESPGSHSS FGLECGGGGG  180
GGGRGKTRAE KDREVAEFLN KHGVNRDAKT AGTKWDNMLG EFRKVYEWER GGEREQVGKT  240
YFRLSPYERK IHRLPASFDE QVFEELSQFM GPKMRHSPTT SFHHLQTSRS LSAPCDLNLK  300
ALPPPYPFKD DNYPLSSMFS DRARQMQSYL TNNPRNPLLG IDPQSSSLNV GVSTSGGTPR  360
VELRRIGRMR MTWEEWVSLW AEEGEYHRGR VKVQGCNFLN ADELIYFDDT MVASSLEAFG  420
DGPLKGFSVD CFTPGQQLKV FGRRKLSSSS SSPSLPLPSS SDFNERIPFA MAAEPSIRWE  480
FQDPTEYYLG CLRAPTTTLP TLFELSWYIQ EPPPEEFRLP LRKDIYRDLP QGRELFFTTS  540
SSEPLDCKSF TIDILSSLIR SIPSITTSNS SSRDSYIALW DDCINRVISK FCPFEIMFTR  600
KQSSKSSSDE SFGDQWPNLT GMVKNLCLWR GEETDQLRES QPFIDPSSSI TKKMSWTYNG  660
IPYVLGYYAI GHNITFCALS PSDSSSQESR ITRTDVYSLD LSNPSERIKL LVPCWRIGIL  720
LASLAEKCIK NHCQSDYERQ DLGDGNIIEM TTKTTTRFYL NKRRWQTTKE IYSVLDQRVV  780
PHVEHLISYN EDELALVFKP RGVKTKPKNM EQLVLALKQV AKALVALHDL SFMHRDLSWD  840
KVLMIMEVNK EDEASSSTEE WFVAGFEEAV GAPQINPVAM AVAVVEEREK YAAEMGRGVH  900
GVKVDVWGIG YLIKTSEVRY EGIVGKQVKE LEGKCMEINP EQRPTAADCY HHLLQIQSSL  960
SSAASTRCS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019107973.1	0.0	PREDICTED: uncharacterized protein LOC104906574
TrEMBL	A0A0J8BFY7	0.0	A0A0J8BFY7_BETVU; Uncharacterized protein
STRING	XP_010693644.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	5e-07	Trihelix family protein