PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv3_064480_rnwf.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

bZIP

Protein Properties

Length: 333aa MW: 36540.8 Da PI: 9.8132

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv3_064480_rnwf.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.6	8.4e-16	263	311	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+ ++ e +k Bv3_064480_rnwf.t1 263 RRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENERLR-RMREVEK 311 79***************************************9.5555555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	5.0E-14	256	305	No hit	No description
SMART	SM00338	1.3E-14	259	327	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.484	261	305	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.41E-23	263	308	No hit	No description
Pfam	PF00170	1.8E-12	263	305	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.38E-11	263	308	No hit	No description
PROSITE pattern	PS00036	0	266	281	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MGTQTMGSQG DTSVPKPPSL SRQGSLYSLT LDEVQNQLGN LGKPLSSMNL DELLRNVWTV 60 EANQSVGGSS NVDNGAQHLN QGGPGPSLNR QSSFNLSRDL SKKTVDEVWR EIQQVKKSSQ 120 ERNPERQNTL GEMTLEDFLV QAGVVLDSVG GGGGNDTNNA GQGNLGGVDP NAARHTNVPQ 180 HAQWMPYQLL PQQQQHSMMT MFMPGHHVPQ SLAVSGGALS DTGYSEAQLA VSTTPLMGTL 240 SDTQAIGRKR LAPGEVVEKT VERRQKRMIK NRESAARSRA RKQAYTHELE NKVSRLEEEN 300 ERLRRMREVE KALPSVPPPQ PKYQLRRTSS APF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	-	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KF773952	5e-88	KF773952.1 Beta vulgaris microsatellite SSR-Unigene26319 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010673247.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_019103829.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-100	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0K9R5G7	0.0	A0A0K9R5G7_SPIOL; Uncharacterized protein
STRING	XP_010673247.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	9e-89	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]