PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv3_052640_ymhm.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 345aa    MW: 36916.9 Da    PI: 7.1907
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv3_052640_ymhm.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1673.2e-21235297163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+elkre+rkq+NRe+ArrsR+RK+ae+eeL + v++L  eN+aL++e+++l+  ++kl+se+
  Bv3_052640_ymhm.t1 235 ERELKREKRKQSNRESARRSRLRKQAEMEELGKQVESLNVENMALQSEINKLEADSEKLRSEN 297
                         89***********************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077772.6E-28187IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.7E-17231295No hitNo description
PfamPF001701.7E-19235297IPR004827Basic-leucine zipper domain
SMARTSM003384.0E-20235299IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.829237300IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.88E-11238294No hitNo description
CDDcd147021.45E-20240287No hitNo description
PROSITE patternPS000360242257IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MGNSEGEKPT KSNKTVSPPR EQSSVHVYPD WATVQTYYGP GALSPPYLNQ AVASGHAAHP  60
YMWAPPQMMA PYGSPYAAMY SHGGLYGPSV PMATTPLSLE TPGKSSGKDS GSGKMKRKSG  120
VRAASGNGNA NAESAGDGGV RGQSQSTDCG TECSCDISDD STAREDYNSR SCNGVLDTGT  180
CNTQMNDVVP GIPIASVKPL TPEMNHCPSA RLDVNAVNAA APCASRPSGV GLQDERELKR  240
EKRKQSNRES ARRSRLRKQA EMEELGKQVE SLNVENMALQ SEINKLEADS EKLRSENAAI  300
MDKLKNMQGQ GNEMGSDRTE HQKMSHINTE NLLSRLSNAV SNGVH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1251257RRSRLRK
2251258RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010671544.10.0PREDICTED: common plant regulatory factor 1 isoform X2
TrEMBLA0A0K9S0Q41e-174A0A0K9S0Q4_SPIOL; Uncharacterized protein
STRINGXP_010671541.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-40G-box binding factor 1