PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_041830_atex.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 455aa    MW: 50104.9 Da    PI: 6.539
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_041830_atex.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.4e-10167210245
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k+ k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Bv2_041830_atex.t1 167 KDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 210
                         677999*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.6E-8160213No hitNo description
SMARTSM003389.3E-8166229IPR004827Basic-leucine zipper domain
PfamPF001705.8E-7167210IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415168212IPR004827Basic-leucine zipper domain
CDDcd147087.06E-22170222No hitNo description
SuperFamilySSF579597.74E-7170213No hitNo description
PROSITE patternPS000360173188IPR004827Basic-leucine zipper domain
PfamPF141446.8E-32252327IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MGVRAGVEDK TAAAIGMPSF DPPIPISNAL EATSISYRVS DFGVLEQTTG YLVENAVGLK  60
NTVIDSTKYS QEIVPSDPRL SISINKASGL SNINPSATQS QDSQQQNLVS VSSGSLENWG  120
ESDMADGSPR TDISTDADTD ERNKRFDRIQ SMTHGASDSS DRSKETKDQK TLRRLAQNRE  180
AARKSRLRKK AYVQQLESSR LKLTQLEQEL QRARQQGIFI SSSGDQANST GGNGAMAFDV  240
EYSRWLEEQN RQINELRAAV NAHAGDAELS VIVTSVVGHY DEIFRLKANA AKNDVFHLLS  300
GMWKTPAERC FLWLGGFRSS ELLKLLVNQL EPLTEQQVIN IQNLQQSSQQ AEDALSQGME  360
ALQQSLAETL SSGNLGSSGS SGNVANYMGQ MAMAMGKLGT LEGFIRQADN LRQQTLQQMH  420
RILTTRQSAR ALLAIHDYFS RLRALSSLWL ARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010670518.10.0PREDICTED: transcription factor TGA6 isoform X1
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLD7TX810.0D7TX81_VITVI; Uncharacterized protein
STRINGXP_010670518.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-157TGACG motif-binding factor 6