PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv2_031530_azhc.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family WRKY
Protein Properties Length: 488aa    MW: 53773.8 Da    PI: 8.6593
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv2_031530_azhc.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY85.45.1e-27149206259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +D y WrKYGqK+vk+s  +rsYYrCts +C++kkkv++ +  ++v++++Y+g+Hnh+
  Bv2_031530_azhc.t1 149 SDVYGWRKYGQKQVKSSGSSRSYYRCTSLSCCAKKKVQHLDVSGQVIDVVYKGDHNHD 206
                         7********************************************************7 PP
2WRKY101.55e-32363420259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dgy+WrKYGqK+vkg+++prsYYrC+s+gCpv+k+ver++++ +++++tYeg+H+h+
  Bv2_031530_azhc.t1 363 SDGYRWRKYGQKMVKGNPHPRSYYRCSSSGCPVRKHVERANDNSTAMIVTYEGKHDHD 420
                         7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-23145208IPR003657WRKY domain
SuperFamilySSF1182902.09E-22145208IPR003657WRKY domain
PROSITE profilePS5081121.712148208IPR003657WRKY domain
SMARTSM007744.4E-26148207IPR003657WRKY domain
PfamPF031066.0E-20150206IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-34348422IPR003657WRKY domain
SuperFamilySSF1182902.09E-28354422IPR003657WRKY domain
PROSITE profilePS5081134.578357422IPR003657WRKY domain
SMARTSM007743.3E-37362421IPR003657WRKY domain
PfamPF031063.6E-26364419IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MASMEEKSNT QIEKNPEINT QNKNTSETNL SDLKSETLSS SSHTNSSYPS FSKLLEGVVM  60
AANSALSSDP SVKTADFQGQ FGMSHQEALA NVTAKAAQAH PQVQPQTEST KSLIKPLSKK  120
KVGELQIKKG NSSYHTDEPP DDVPRTPMSD VYGWRKYGQK QVKSSGSSRS YYRCTSLSCC  180
AKKKVQHLDV SGQVIDVVYK GDHNHDPPQN VKGSSRKKDT TPRALNHSSD SSVQNLDAPR  240
SLTCEKEIKQ LVPSTTEGQD ENLNRAAGTP PRDVEEQYTK TVDTTSRLGN ELATVPVVEE  300
HSGTRSDNSN ELAMNNPMKE PDVMPMKKRR IKERGKACSE SVYRTFKDPK IVVHTAADVA  360
MSSDGYRWRK YGQKMVKGNP HPRSYYRCSS SGCPVRKHVE RANDNSTAMI VTYEGKHDHD  420
IPTPKKQHHA SPNYSPVSGA NTVLDKSENE PRDMVSDLGE EKTSEAGGDK VLESARTLLS  480
IGIELKSC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-30350422274WRKY transcription factor 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1326331KKRRIK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010667565.10.0PREDICTED: probable WRKY transcription factor 32 isoform X1
TrEMBLA0A0J8D1E30.0A0A0J8D1E3_BETVU; Uncharacterized protein
STRINGXP_010667565.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-75WRKY DNA-binding protein 32