PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_011670_nwdc.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bZIP
Protein Properties Length: 270aa    MW: 29494.5 Da    PI: 5.3508
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_011670_nwdc.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1452.3e-14189249362
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklkse 62 
                         + +r+rr++kNRe+A rsR+RK+a++ eLe+ + +Le+eN++L ++++ + k+  ++l  +
  Bv1_011670_nwdc.t1 189 AQQRQRRMIKNRESAARSRERKQAYQVELETLAMKLEKENEELlREKAARTKERFKQLMEK 249
                         679*************************************996378888888888887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-13184247No hitNo description
SMARTSM003383.9E-10187251IPR004827Basic-leucine zipper domain
PfamPF001701.3E-12189249IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.645189241IPR004827Basic-leucine zipper domain
CDDcd147072.98E-16191233No hitNo description
SuperFamilySSF579595.2E-9191242No hitNo description
PROSITE patternPS000360194209IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MNIDGILRDV VYAENAAESG PNTLLDAEIT LIDAAGAISA IGNGEDAEIH RSRKTAEEVW  60
REIVSGKNER KECKVEAPDE MMTLEDFLAK AGAGMEGEEE EEEDVKFEVS GGMQMSGGLF  120
AFDHPLAQSS YPQPPPMPAA MGGVMVYGDG GSGSGGGIAA GGGGSMEVLG GVRGKRRGGP  180
ILEPLDKAAQ QRQRRMIKNR ESAARSRERK QAYQVELETL AMKLEKENEE LLREKAARTK  240
ERFKQLMEKV VPVVKKKPPH VLRRVRSMQW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010680820.10.0PREDICTED: G-box-binding factor 4-like
TrEMBLF6GY428e-80F6GY42_VITVI; Uncharacterized protein
STRINGXP_010680820.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.15e-23G-box binding factor 4